@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : new_query: (2014-05-04 )
AISCGQVSSALSPCISYARGNGAKPPAACCSGVKRLAGAAQSTADKQAACKCIKSAAGGLNAGKAAGIPSMCGVSVPYAISASVDCSKIR

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



HP6_G_7(2ALG)
NLTP1_PRUPE
[Raw transfer]



LPC_A_4(1BWO)
NLTP1_WHEAT
[Raw transfer]
11 SP3 92.0366%-116 - C5 -1FK5 6.1 NLTP_MAIZE
16 HHSearch 89.2859%-123 - C5 -1T12 - NLTP1_TOBAC -
15 HHSearch 88.0167%-116 - C5 -1AFH - NLTP_MAIZE -
18 HHSearch 87.9449%-123 - C5 -2ALG 2.4 NLTP1_PRUPE
20 HHSearch 85.4947%-118 - C5 -1BWO 3.5 NLTP1_WHEAT
19 HHSearch 81.7942%-131 - C5 -1SIY - NLTP1_VIGRR -
28 HHSearch 58.6921%-133 - C5 -1BEA - ITRF_MAIZE -
33 HHSearch 56.3413% -98 - C5 -1W2Q - CONG_ARAHY -
31 HHSearch 56.2435%-110 - C5 -1PSY - 2SS_RICCO -
29 HHSearch 55.0524% -86 - C5 -1SM7 - ? -
3 Fugue 51.3530% -97 - C5 -1L6H - NLTPX_ORYSJ -
21 HHSearch 50.0322% -85 - C5 -2RKN - DIRL1_ARATH -
25 HHSearch 47.4922%-112 - C5 -1S6D - 2SS8_HELAN -
2 Fugue 46.5722% -86 - C5 -2RKN - DIRL1_ARATH -
27 HHSearch 45.3516%-106 - C5 -1B1U - IAAT_ELECO -
30 HHSearch 41.4517% -81 - C5 -3OB4 - ? -
8 Fugue 39.6025% -56 - C5 -1PSY - 2SS_RICCO -
7 Fugue 37.9714% -51 - C5 -1W2Q - CONG_ARAHY -
22 HHSearch 35.4933% -70 - C5 -1L6H - NLTPX_ORYSJ -
23 HHSearch 35.1629% -53 - C5 -1N89 - NLT2G_WHEAT -


User Run . : Multi Template Modeling Result:

(5 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



HP6_G_7(2ALG)
NLTP1_PRUPE
[Raw transfer]



LPC_A_4(1BWO)
NLTP1_WHEAT
[Raw transfer]
34 99.21100%-130 - C- -M034 - -
36 95.25100%-135 - C- -M036 - -
38 93.89100%-122 - C- -M038 - -
39 93.04100%-129 - C- -M039 - -
40 93.03100%-120 - C- -M040 - -