@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : new_query: (2014-05-05 )
AITCGQVVSSLSQCASYLRNGGAVPPACCSGVKSLNSAARTTPDRQTVCGCLKRASGGVNASNAASLPGKCGVNIPYKISPSTDCSKVQ

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]



LPC_A_4(1BWO)
NLTP1_WHEAT
[Raw transfer]
14 HHSearch 98.7166%-116 - C4 -1T12 - NLTP1_TOBAC -
11 HHSearch 94.7366%-111 - C4 -2ALG 3.5 NLTP1_PRUPE
32 SP3 92.5261%-104 - C4 -1FK5 5.5 NLTP_MAIZE
15 HHSearch 90.3759%-114 - C4 -1SIY - NLTP1_VIGRR -
12 HHSearch 89.6562%-104 - C4 -1AFH - NLTP_MAIZE -
16 HHSearch 86.6948%-114 - C4 -1BWO 3.7 NLTP1_WHEAT
27 HHSearch 65.8528%-116 - C4 -1SM7 - ? -
24 HHSearch 60.5622%-119 - C4 -1BEA - ITRF_MAIZE -
22 HHSearch 55.5124%-111 - C4 -1S6D - 2SS8_HELAN -
17 HHSearch 53.4124% -87 - C4 -2RKN - DIRL1_ARATH -
31 HHSearch 51.4322% -84 - C4 -2LVF - ? -
2 Fugue 50.7826% -66 - C4 -2RKN - DIRL1_ARATH -
23 HHSearch 50.1216%-111 - C4 -1B1U - IAAT_ELECO -
28 HHSearch 49.5119% -88 * C4 *1W2Q - CONG_ARAHY -
3 Fugue 48.4024% -74 - C4 -1L6H - NLTPX_ORYSJ -
26 HHSearch 46.0529% -58 - C4 -1PSY - 2SS_RICCO -
6 Fugue 44.8623% -87 - C4 -1HSS - IAA1_WHEAT -
7 Fugue 44.1521% -44 - C4 -1S6D - 2SS8_HELAN -
18 HHSearch 42.8432% -66 - C4 -1L6H - NLTPX_ORYSJ -
5 Fugue 40.1825% -27 - C4 -1PSY - 2SS_RICCO -


User Run . : Multi Template Modeling Result:

(4 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]



LPC_A_4(1BWO)
NLTP1_WHEAT
[Raw transfer]
46 98.97100%-125 - C- -M046 - -
41 98.18100%-116 - C- -M041 - -
48 96.03100%-118 - C- -M048 - -
47 94.38100%-118 - C- -M047 - -