@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : new_query: (2014-05-05 )
AISCGAVTSDLSPCLTYLTGGPGPSPQCCGGVKKLLAAANTTPDRQAACNCLKSAAGSITKLNTNNAAALPGKCGVDIPYKISTSTNCNTVKF

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]



LPC_A_3(1BWO)
NLTP1_WHEAT
[Raw transfer]



LPC_A_4(1BWO)
NLTP1_WHEAT
[Raw transfer]
22 HHSearch 95.0060%-123 - C3 -1T12 - NLTP1_TOBAC -
21 HHSearch 91.7461%-118 - C3 -2ALG 3.9 NLTP1_PRUPE
25 HHSearch 91.5154%-117 - C3 -1BWO 6.7 NLTP1_WHEAT
24 HHSearch 90.7255%-112 - C3 -1SIY - NLTP1_VIGRR -
11 SP3 85.7156%-112 - C3 -1FK5 5.6 NLTP_MAIZE
23 HHSearch 84.8758%-104 - C3 -1AFH - NLTP_MAIZE -
38 HHSearch 59.8022%-130 * C3 *1HSS - IAA1_WHEAT -
36 HHSearch 58.1829%-103 - C3 -1SM7 - ? -
16 SP3 55.4218%-116 - C3 -1HSS - IAA1_WHEAT -
31 HHSearch 54.6922%-123 - C3 -1BEA - ITRF_MAIZE -
5 Fugue 53.8622% -81 - C3 -1S6D - 2SS8_HELAN -
39 HHSearch 53.0817% -92 - C3 -1W2Q - CONG_ARAHY -
34 HHSearch 51.6030% -63 - C3 -1PSY - 2SS_RICCO -
40 HHSearch 51.0820% -82 - C3 -2LVF - ? -
18 SP3 51.0620%-114 - C3 -1QPO - NADC_MYCTU -
26 HHSearch 50.2627% -74 - C3 -2RKN - DIRL1_ARATH -
6 Fugue 47.9727% -65 - C3 -1PSY - 2SS_RICCO -
30 HHSearch 47.7613%-112 - C3 -1B1U - IAAT_ELECO -
35 HHSearch 45.2121% -84 - C3 -1S6D - 2SS8_HELAN -
2 Fugue 44.8924% -69 - C3 -2RKN - DIRL1_ARATH -


User Run . : Multi Template Modeling Result:

(4 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]



LPC_A_3(1BWO)
NLTP1_WHEAT
[Raw transfer]



LPC_A_4(1BWO)
NLTP1_WHEAT
[Raw transfer]
48 94.73100%-121 - C- -M048 - -
44 92.93100%-122 - C- -M044 - -
45 92.27100%-115 - C- -M045 - -
47 91.34100%-122 - C- -M047 - -