@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : new_query: (2014-05-05 )
AISCGAVTSDLSPCLTYLTGGPGPSPQCCGGVKKLLAAANTTPDRQAACNCLKSAAGSITKLNTNNAAALPGKCGVNIPYKISTSTNCNTVKF

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]



OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



LPC_A_3(1BWO)
NLTP1_WHEAT
[Raw transfer]



LPC_A_4(1BWO)
NLTP1_WHEAT
[Raw transfer]
12 HHSearch 95.7262%-123 - C5 -1T12 - NLTP1_TOBAC -
15 HHSearch 92.3456%-117 - C5 -1BWO 6.5 NLTP1_WHEAT
11 HHSearch 91.7661%-118 - C5 -2ALG 3.9 NLTP1_PRUPE
14 HHSearch 91.3556%-112 - C5 -1SIY - NLTP1_VIGRR -
31 SP3 85.6956%-112 - C5 -1FK5 5.6 NLTP_MAIZE
13 HHSearch 85.0958%-104 - C5 -1AFH - NLTP_MAIZE -
25 HHSearch 58.2429%-102 - C5 -1SM7 - ? -
28 HHSearch 57.6122%-129 * C5 *1HSS - IAA1_WHEAT -
30 HHSearch 56.0918% -97 - C5 -1W2Q - CONG_ARAHY -
21 HHSearch 55.1122%-126 - C5 -1BEA - ITRF_MAIZE -
24 HHSearch 51.9930% -63 - C5 -1PSY - 2SS_RICCO -
5 Fugue 51.9822% -81 - C5 -1S6D - 2SS8_HELAN -
37 SP3 51.8219%-113 - C5 -1QPO - NADC_MYCTU -
36 SP3 50.3418%-114 - C5 -1HSS - IAA1_WHEAT -
16 HHSearch 48.4127% -84 - C5 -2RKN - DIRL1_ARATH -
20 HHSearch 48.1513%-111 - C5 -1B1U - IAAT_ELECO -
29 HHSearch 47.5820% -80 - C5 -2LVF - ? -
3 Fugue 45.6326% -68 - C5 -1L6H - NLTPX_ORYSJ -
26 HHSearch 45.3221% -88 - C5 -1S6D - 2SS8_HELAN -
2 Fugue 45.2824% -69 - C5 -2RKN - DIRL1_ARATH -


User Run . : Multi Template Modeling Result:

(5 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]



OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



LPC_A_3(1BWO)
NLTP1_WHEAT
[Raw transfer]



LPC_A_4(1BWO)
NLTP1_WHEAT
[Raw transfer]
47 96.55100%-126 - C- -M047 - -
46 96.17100%-117 - C- -M046 - -
42 95.84100%-120 - C- -M042 - -
41 95.18100%-121 - C- -M041 - -
45 93.27100%-122 - C- -M045 - -