@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : new_query: (2014-05-05 )
AIGCNTVASKMAPCLPYVTGKGPLGGCCGGVKGLIDAARTTPDRQAVCNCLKTLAKSYSGINLGNAAGLPGKCGVSIPYQISPNTDCSKVH

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]



LPC_A_3(1BWO)
NLTP1_WHEAT
[Raw transfer]



LPC_A_4(1BWO)
NLTP1_WHEAT
[Raw transfer]
10 HHSearch 97.7965%-142 - C3 -1T12 - NLTP1_TOBAC -
11 HHSearch 88.4057%-138 - C3 -2ALG 3.8 NLTP1_PRUPE
15 HHSearch 86.6752%-127 - C3 -1BWO 6.5 NLTP1_WHEAT
28 SP3 85.8961%-125 - C3 -1FK5 4.6 NLTP_MAIZE
12 HHSearch 81.7662%-123 - C3 -1AFH - NLTP_MAIZE -
14 HHSearch 81.4546%-131 - C3 -1SIY - NLTP1_VIGRR -
22 HHSearch 55.7427%-150 - C3 -1BEA - ITRF_MAIZE -
32 SP3 54.7019%-108 - C3 -1QPO - NADC_MYCTU -
24 HHSearch 53.1527%-128 - C3 -1SM7 - ? -
31 SP3 50.9619%-109 - C3 -1QPO - NADC_MYCTU -
23 HHSearch 48.0521%-123 - C3 -3OB4 - ? -
25 HHSearch 46.8723% -81 - C3 -1PSY - 2SS_RICCO -
21 HHSearch 46.4019%-134 * C3 *1B1U - IAAT_ELECO -
16 HHSearch 45.2223%-100 - C3 -2RKN - DIRL1_ARATH -
27 HHSearch 44.8818%-129 - C3 -1S6D - 2SS8_HELAN -
33 SP3 39.7920% -85 - C3 -1L6H - NLTPX_ORYSJ -
3 Fugue 39.1720% -85 - C3 -1L6H - NLTPX_ORYSJ -
2 Fugue 38.0421% -71 - C3 -2RKN - DIRL1_ARATH -
8 Fugue 34.0812% -66 - C3 -1W2Q - CONG_ARAHY -
18 HHSearch 32.9631% -55 - C3 -1N89 - NLT2G_WHEAT -


User Run . : Multi Template Modeling Result:

(4 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]



LPC_A_3(1BWO)
NLTP1_WHEAT
[Raw transfer]



LPC_A_4(1BWO)
NLTP1_WHEAT
[Raw transfer]
42 98.63100%-153 - C- -M042 - -
38 94.92100%-152 - C- -M038 - -
39 44.74100% - - C- -M039 - -
43 44.71100% - - C- -M043 - -