@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : new_query: (2014-05-05 )
ITCGQVDSDLTSCLGYARKGGVIPPGCCAGVRTLNNLAKTTPDRQTACNCLKSLVNPSLGLNAAIVAGIPGKCGVNIPYPIRMQTDCNKVR

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]




DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]




LPC_A_4(1BWO)
NLTP1_WHEAT
[Raw transfer]




24 HHSearch 91.6654%-125 - C3 -1T12 - NLTP1_TOBAC -
21 HHSearch 91.3757%-129 - C3 -2ALG 3.8 NLTP1_PRUPE
22 HHSearch 91.2355%-109 - C3 -1AFH - NLTP_MAIZE -
11 SP3 90.7854%-120 - C3 -1FK5 6.0 NLTP_MAIZE
23 HHSearch 89.4847%-133 - C3 -1SIY - NLTP1_VIGRR -
26 HHSearch 81.3446%-133 - C3 -1BWO 5.2 NLTP1_WHEAT
33 HHSearch 61.2021%-163 - C3 -1BEA - ITRF_MAIZE -
37 HHSearch 55.7618%-129 - C3 -1S6D - 2SS8_HELAN -
34 HHSearch 55.3522%-130 - C3 -1SM7 - ? -
2 Fugue 55.2323%-100 - C3 -2RKN - DIRL1_ARATH -
36 HHSearch 53.4529% -96 - C3 -1PSY - 2SS_RICCO -
32 HHSearch 52.9820%-128 - C3 -1B1U - IAAT_ELECO -
27 HHSearch 52.5220%-113 - C3 -2RKN - DIRL1_ARATH -
9 Fugue 51.0518% -95 - C3 -1S6D - 2SS8_HELAN -
13 SP3 49.1318%-104 - C3 -1QPO - NADC_MYCTU -
3 Fugue 46.8321% -79 - C3 -1L6H - NLTPX_ORYSJ -
19 SP3 44.9918%-101 - C3 -1QPO - NADC_MYCTU -
14 SP3 40.3518% -68 - C3 -1L6H - NLTPX_ORYSJ -
15 SP3 40.0016% -40 - C3 -1DLW - TRHBN_PARCA -
5 Fugue 38.9716% -59 - C3 -2DGZ - WRN_HUMAN -


User Run . : Multi Template Modeling Result:

(4 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]




DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]




LPC_A_4(1BWO)
NLTP1_WHEAT
[Raw transfer]




39 96.00100%-137 - C- -M039 - -
40 94.32100%-135 - C- -M040 - -
43 92.21100%-146 - C- -M043 - -
46 89.42100%-122 - C- -M046 - -