@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : new_query: (2014-05-05 )
ITCGQVSSNLVPCFDYVRSGGPVPPACCNGIRTINGLAKTTPDRQAACNCLKSLAGSVSGVNPGNVESLPGKCGVNVPYKISTSTNCATVK

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]




OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]




11 HHSearch 93.9277%-122 - C2 -2ALG 3.8 NLTP1_PRUPE
14 HHSearch 86.4956%-121 - C2 -1T12 - NLTP1_TOBAC -
13 HHSearch 85.0957%-120 - C2 -1SIY - NLTP1_VIGRR -
30 SP3 84.6854%-120 - C2 -1FK5 5.5 NLTP_MAIZE
16 HHSearch 77.7743%-124 - C2 -1BWO - NLTP1_WHEAT -
12 HHSearch 77.0355% -99 - C2 -1AFH - NLTP_MAIZE -
25 HHSearch 60.8730%-135 - C2 -1SM7 - ? -
24 HHSearch 60.7925%-139 - C2 -1BEA - ITRF_MAIZE -
38 SP3 60.7019%-141 - C2 -1HSS - IAA1_WHEAT -
29 HHSearch 59.0023%-149 * C2 *1HSS - IAA1_WHEAT -
35 SP3 55.4717%-115 - C2 -1QPO - NADC_MYCTU -
32 SP3 50.4717%-115 - C2 -1QPO - NADC_MYCTU -
17 HHSearch 49.5428% -95 - C2 -2RKN - DIRL1_ARATH -
23 HHSearch 46.0221% -83 - C2 -1PSY - 2SS_RICCO -
2 Fugue 45.6227% -70 - C2 -2RKN - DIRL1_ARATH -
22 HHSearch 44.5722%-101 - C2 -1B1U - IAAT_ELECO -
9 Fugue 44.5618% -98 - C2 -1S6D - 2SS8_HELAN -
26 HHSearch 44.3322% -86 - C2 -3OB4 - ? -
7 Fugue 43.7422% -57 - C2 -3Q87 - ? -
28 HHSearch 42.6721% -87 - C2 -2LVF - ? -


User Run . : Multi Template Modeling Result:

(2 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]




OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]




41 95.54100%-133 - C- -M041 - -
46 87.87100%-126 - C- -M046 - -