@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : new_query: (2014-05-05 )
ITCGQVTSSLAPCIGYVRNGGAVPPACCNGIRTINSLARTTADRQTACNCLKNLAGSISGVNPNNAAGLPGKCGVNVPYKISTSTNCATVK

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]



LPC_A_4(1BWO)
NLTP1_WHEAT
[Raw transfer]
11 HHSearch 93.0281%-126 - C2 -2ALG 3.6 NLTP1_PRUPE
32 SP3 85.6858%-122 - C2 -1FK5 5.3 NLTP_MAIZE
13 HHSearch 85.6461%-124 - C2 -1T12 - NLTP1_TOBAC -
14 HHSearch 85.4660%-123 - C2 -1SIY - NLTP1_VIGRR -
16 HHSearch 81.3846%-131 - C2 -1BWO 4.8 NLTP1_WHEAT
12 HHSearch 80.0958%-114 - C2 -1AFH - NLTP_MAIZE -
40 SP3 62.3019%-138 - C2 -1HSS - IAA1_WHEAT -
27 HHSearch 59.7629%-131 - C2 -1SM7 - ? -
30 HHSearch 58.9923%-153 * C2 *1HSS - IAA1_WHEAT -
25 HHSearch 56.6724%-132 - C2 -1BEA - ITRF_MAIZE -
34 SP3 53.6818%-113 - C2 -1QPO - NADC_MYCTU -
21 HHSearch 50.5920% -93 - C2 -2LVF - ? -
24 HHSearch 48.4924% -84 - C2 -1PSY - 2SS_RICCO -
17 HHSearch 48.1328% -89 - C2 -2RKN - DIRL1_ARATH -
31 HHSearch 47.4818% -91 - C2 -1W2Q - CONG_ARAHY -
5 Fugue 47.4822% -38 - C2 -1PSY - 2SS_RICCO -
23 HHSearch 46.3219%-115 - C2 -1B1U - IAAT_ELECO -
9 Fugue 45.7118% -99 - C2 -1S6D - 2SS8_HELAN -
3 Fugue 45.6726% -95 - C2 -1L6H - NLTPX_ORYSJ -
38 SP3 45.1418%-113 - C2 -1QPO - NADC_MYCTU -


User Run . : Multi Template Modeling Result:

(4 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]



LPC_A_4(1BWO)
NLTP1_WHEAT
[Raw transfer]
42 94.12100%-130 - C- -M042 - -
48 90.70100%-128 - C- -M048 - -
47 90.42100%-133 - C- -M047 - -
44 85.88100%-133 - C- -M044 - -