@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : new_query: (2014-05-05 )
ITCGQVTSSLAPCIGYVRSGGAVPPACCNGIRTINGLARTTADRQTACNCLKNLAGSISGVNPNNAAGLPGKCGVNVPYKISTSTNCATVK

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]




DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]




LPC_A_4(1BWO)
NLTP1_WHEAT
[Raw transfer]




11 HHSearch 90.9981%-128 - C2 -2ALG 3.6 NLTP1_PRUPE
32 SP3 87.0258%-124 - C2 -1FK5 5.3 NLTP_MAIZE
14 HHSearch 85.1660%-124 - C2 -1SIY - NLTP1_VIGRR -
13 HHSearch 83.8860%-125 - C2 -1T12 - NLTP1_TOBAC -
16 HHSearch 80.5146%-134 - C2 -1BWO 4.7 NLTP1_WHEAT
12 HHSearch 79.8658%-115 - C2 -1AFH - NLTP_MAIZE -
26 HHSearch 61.8429%-131 - C2 -1SM7 - ? -
31 HHSearch 60.0823%-156 * C2 *1HSS - IAA1_WHEAT -
40 SP3 59.4619%-141 - C2 -1HSS - IAA1_WHEAT -
24 HHSearch 58.7125%-132 - C2 -1BEA - ITRF_MAIZE -
29 HHSearch 49.1420% -94 - C2 -2LVF - ? -
34 SP3 49.0317%-115 - C2 -1QPO - NADC_MYCTU -
23 HHSearch 47.9824% -86 - C2 -1PSY - 2SS_RICCO -
30 HHSearch 47.3718% -95 - C2 -1W2Q - CONG_ARAHY -
5 Fugue 47.0522% -40 - C2 -1PSY - 2SS_RICCO -
3 Fugue 46.8427% -95 - C2 -1L6H - NLTPX_ORYSJ -
22 HHSearch 46.6819%-119 - C2 -1B1U - IAAT_ELECO -
17 HHSearch 46.1924% -89 - C2 -2RKN - DIRL1_ARATH -
10 Fugue 44.8918%-100 - C2 -1S6D - 2SS8_HELAN -
38 SP3 44.4617%-115 - C2 -1QPO - NADC_MYCTU -


User Run . : Multi Template Modeling Result:

(3 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]




DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]




LPC_A_4(1BWO)
NLTP1_WHEAT
[Raw transfer]




42 94.01100%-132 - C- -M042 - -
43 92.43100%-130 - C- -M043 - -
46 91.21100%-130 - C- -M046 - -