@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : new_query: (2014-05-05 )
LSCGQVQSGLAPCLPYLQGRGPLGSCCGGVKGLLGAAKSLSDRKTACTCLKSAANAIKGIDMGKAAGLPGACGVNIPYKISPSTDCSKVQ

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



HP6_G_7(2ALG)
NLTP1_PRUPE
[Raw transfer]



LPC_A_4(1BWO)
NLTP1_WHEAT
[Raw transfer]
11 HHSearch 94.1372%-132 - C3 -1T12 - NLTP1_TOBAC -
13 HHSearch 83.5151%-122 - C3 -1SIY - NLTP1_VIGRR -
16 HHSearch 82.4351%-127 - C3 -1BWO 4.5 NLTP1_WHEAT
15 HHSearch 80.8448%-130 - C3 -2ALG 2.8 NLTP1_PRUPE
30 SP3 78.4053%-125 - C3 -1FK5 5.6 NLTP_MAIZE
12 HHSearch 76.3953%-110 - C3 -1AFH - NLTP_MAIZE -
23 HHSearch 54.6926%-161 - C3 -1BEA - ITRF_MAIZE -
24 HHSearch 53.5826%-129 - C3 -1SM7 - ? -
21 HHSearch 46.6617%-138 - C3 -1B1U - IAAT_ELECO -
17 HHSearch 45.5828%-104 - C3 -2RKN - DIRL1_ARATH -
26 HHSearch 45.4428%-102 - C3 -1PSY - 2SS_RICCO -
28 HHSearch 44.7928%-113 - C3 -1S6D - 2SS8_HELAN -
2 Fugue 42.9327% -77 - C3 -2RKN - DIRL1_ARATH -
25 HHSearch 42.7620% -98 - C3 -3OB4 - ? -
4 Fugue 40.8720% -91 - C3 -1L6H - NLTPX_ORYSJ -
6 Fugue 38.5419% -55 - C3 -1S6D - 2SS8_HELAN -
5 Fugue 38.0321% -52 - C3 -1W2Q - CONG_ARAHY -
19 HHSearch 35.1229% -49 - C3 -1N89 - NLT2G_WHEAT -
20 HHSearch 31.9927% -69 - C3 -1PNB - ? -
18 HHSearch 31.2723% -80 - C3 -1L6H - NLTPX_ORYSJ -


User Run . : Multi Template Modeling Result:

(3 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



HP6_G_7(2ALG)
NLTP1_PRUPE
[Raw transfer]



LPC_A_4(1BWO)
NLTP1_WHEAT
[Raw transfer]
35 97.61100%-147 - C- -M035 - -
37 94.29100%-135 - C- -M037 - -
36 93.69100%-131 - C- -M036 - -