@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : new_query: (2014-05-05 )
AISCSTVISDLVPCLSYVTGSAASPTAACCNGVKALNAAAQTTPDRQAACKCIKSAAASYHYNSAKADKIPALCGVNIGIPISPSTTCDKIH

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]




DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]




LPC_A_4(1BWO)
NLTP1_WHEAT
[Raw transfer]




22 HHSearch 96.3952%-128 - C2 -1T12 - NLTP1_TOBAC -
11 SP3 92.9350%-119 - C2 -1FK5 5.6 NLTP_MAIZE
23 HHSearch 89.9746%-123 - C2 -2ALG 4.2 NLTP1_PRUPE
21 HHSearch 88.9550%-112 - C2 -1AFH - NLTP_MAIZE -
26 HHSearch 85.9043%-109 - C2 -1BWO 5.4 NLTP1_WHEAT
25 HHSearch 84.4537%-125 - C2 -1SIY - NLTP1_VIGRR -
5 Fugue 71.5920%-119 - C2 -1S6D - 2SS8_HELAN -
7 Fugue 70.0025% -99 - C2 -1PSY - 2SS_RICCO -
33 HHSearch 67.0732% -98 - C2 -1PSY - 2SS_RICCO -
35 HHSearch 64.8624%-127 - C2 -1SM7 - ? -
37 HHSearch 62.0219%-135 - C2 -1BEA - ITRF_MAIZE -
19 SP3 59.7016%-130 - C2 -1HSS - IAA1_WHEAT -
41 HHSearch 56.7520%-125 - C2 -1HSS - IAA1_WHEAT -
16 SP3 51.9418% -87 - C2 -1QPO - NADC_MYCTU -
38 HHSearch 51.1611%-100 - C2 -1W2Q - CONG_ARAHY -
12 SP3 50.5023% -93 - C2 -1L6H - NLTPX_ORYSJ -
27 HHSearch 49.0023% -96 - C2 -2RKN - DIRL1_ARATH -
39 HHSearch 48.6618% -86 - C2 -2LVF - ? -
34 HHSearch 47.4617% -88 - C2 -1B1U - IAAT_ELECO -
2 Fugue 47.1822% -72 - C2 -2RKN - DIRL1_ARATH -


User Run . : Multi Template Modeling Result:

(4 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]




DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]




LPC_A_4(1BWO)
NLTP1_WHEAT
[Raw transfer]




48 98.43100%-129 - C- -M048 - -
42 97.10100%-122 - C- -M042 - -
46 96.63100%-124 - C- -M046 - -
47 46.90100% - - C- -M047 - -