@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : new_query: (2014-05-05 )
AISCSTVIADLVPCLSYVTGSAASPPAACCNGVKTLNAAAQTTPDRQAACKCIKSAAASYHYNSAKADKIPALCGVNIGIPISPSTSCDTIH

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]




DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]




LPC_A_4(1BWO)
NLTP1_WHEAT
[Raw transfer]




22 HHSearch 96.5649%-127 - C2 -1T12 - NLTP1_TOBAC -
11 SP3 93.6948%-120 - C2 -1FK5 5.6 NLTP_MAIZE
21 HHSearch 89.6649%-112 - C2 -1AFH - NLTP_MAIZE -
23 HHSearch 88.3647%-123 - C2 -2ALG 4.2 NLTP1_PRUPE
26 HHSearch 84.5342%-110 - C2 -1BWO 5.2 NLTP1_WHEAT
25 HHSearch 82.8738%-124 - C2 -1SIY - NLTP1_VIGRR -
4 Fugue 69.7920%-130 - C2 -1S6D - 2SS8_HELAN -
8 Fugue 65.3324% -92 - C2 -1PSY - 2SS_RICCO -
33 HHSearch 63.5431% -92 - C2 -1PSY - 2SS_RICCO -
19 SP3 61.6216%-141 - C2 -1HSS - IAA1_WHEAT -
34 HHSearch 61.1625%-117 - C2 -1SM7 - ? -
36 HHSearch 60.6819%-129 - C2 -1BEA - ITRF_MAIZE -
41 HHSearch 56.0621%-124 - C2 -1HSS - IAA1_WHEAT -
17 SP3 52.6116% -95 - C2 -1QPO - NADC_MYCTU -
7 Fugue 51.7116% -91 - C2 -1W2Q - CONG_ARAHY -
12 SP3 51.0320% -90 - C2 -1L6H - NLTPX_ORYSJ -
38 HHSearch 50.7111% -95 - C2 -1W2Q - CONG_ARAHY -
27 HHSearch 49.7523% -95 - C2 -2RKN - DIRL1_ARATH -
15 SP3 49.4516% -95 - C2 -1QPO - NADC_MYCTU -
2 Fugue 47.1820% -86 - C2 -2RKN - DIRL1_ARATH -


User Run . : Multi Template Modeling Result:

(4 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]




DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]




LPC_A_4(1BWO)
NLTP1_WHEAT
[Raw transfer]




46 96.34100%-130 - C- -M046 - -
42 93.02100%-120 - C- -M042 - -
48 91.00100%-127 - C- -M048 - -
43 48.30100% - - C- -M043 - -