@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : 325_tI_POPCN: (2014-05-06 )
LTCGVVASNLAPCIGYLRNGGKVPDPCCKGVGALNNAAKTTKDRRDACNCIKTTATQIGGVNAANAAALPGFCRVNIPYKISTSTNCASIK

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



FMT_A_4(1FK5)
NLTP_MAIZE
[Raw transfer]



FMT_A_3(1FK5)
NLTP_MAIZE
[Raw transfer]



DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]



LPC_A_4(1BWO)
NLTP1_WHEAT
[Raw transfer]
3 HHSearch 95.9857%-117 - C1 -1T12 - NLTP1_TOBAC -
1 HHSearch 95.9460%-120 - C1 -2ALG 3.9 NLTP1_PRUPE
4 HHSearch 95.8858%-121 - C1 -1SIY - NLTP1_VIGRR -
32 SP3 91.2454%-122 - C1 -1FK5 5.3 NLTP_MAIZE
2 HHSearch 87.5255%-110 - C1 -1AFH - NLTP_MAIZE -
6 HHSearch 85.7440%-111 - C1 -1BWO 3.5 NLTP1_WHEAT
16 HHSearch 64.4024%-128 - C1 -1SM7 - ? -
18 HHSearch 62.6223%-132 - C1 -1HSS - IAA1_WHEAT -
28 Fugue 56.8125% -69 - C1 -1PSY - 2SS_RICCO -
11 HHSearch 56.7727% -66 - C1 -1PSY - 2SS_RICCO -
40 SP3 56.1020%-128 - C1 -1HSS - IAA1_WHEAT -
15 HHSearch 55.6817%-127 - C1 -1BEA - ITRF_MAIZE -
7 HHSearch 53.5723%-121 - C1 -2RKN - DIRL1_ARATH -
12 HHSearch 53.3917%-130 - C1 -1B1U - IAAT_ELECO -
35 SP3 53.1314% -87 - C1 -1O4U - ? -
23 Fugue 52.8223% -87 - C1 -2RKN - DIRL1_ARATH -
20 HHSearch 51.7318% -81 - C1 -1W2Q - CONG_ARAHY -
34 SP3 48.1220% -66 - C1 -1L6H - NLTPX_ORYSJ -
37 SP3 47.5614% -94 - C1 -1QPO - NADC_MYCTU -
19 HHSearch 47.3720% -63 - C1 -2LVF - ? -


User Run . : Multi Template Modeling Result:

(4 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



FMT_A_4(1FK5)
NLTP_MAIZE
[Raw transfer]



FMT_A_3(1FK5)
NLTP_MAIZE
[Raw transfer]



DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]



LPC_A_4(1BWO)
NLTP1_WHEAT
[Raw transfer]
49 97.89100%-133 - C- -M049 - -
43 97.79100%-128 - C- -M043 - -
46 97.53100%-123 - C- -M046 - -
48 96.20100%-139 - C- -M048 - -