@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : new_query: (2014-05-06 )
AISCGQVSSSLAQCITYLQKGGAVPAACCSGLKGLNSAATTTADRQGVCNCLKSLAGKISGINYGVAAGLPSKCGVSISYKISPSTDCKSVK

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]
21 HHSearch 94.2563%-135 - C3 -1T12 - NLTP1_TOBAC -
11 SP3 94.1359%-129 - C3 -1FK5 4.3 NLTP_MAIZE
20 HHSearch 90.5861%-132 - C3 -2ALG 3.9 NLTP1_PRUPE
24 HHSearch 87.8156%-125 - C3 -1SIY - NLTP1_VIGRR -
22 HHSearch 85.4160%-127 - C3 -1AFH - NLTP_MAIZE -
25 HHSearch 81.5642%-145 - C3 -1BWO - NLTP1_WHEAT -
39 HHSearch 62.2325%-183 * C3 *1HSS - IAA1_WHEAT -
7 Fugue 60.8825%-110 - C3 -1S6D - 2SS8_HELAN -
33 HHSearch 59.6629%-148 - C3 -1SM7 - ? -
16 SP3 56.1621%-156 - C3 -1HSS - IAA1_WHEAT -
32 HHSearch 56.1024%-166 - C3 -1BEA - ITRF_MAIZE -
37 HHSearch 55.4625%-140 - C3 -1S6D - 2SS8_HELAN -
26 HHSearch 52.8026%-115 - C3 -2RKN - DIRL1_ARATH -
35 HHSearch 52.0226%-103 - C3 -1PSY - 2SS_RICCO -
38 HHSearch 51.4826%-116 - C3 -2LVF - ? -
2 Fugue 51.0825% -91 - C3 -2RKN - DIRL1_ARATH -
4 Fugue 50.7724%-106 - C3 -1HSS - IAA1_WHEAT -
31 HHSearch 48.9519%-149 - C3 -1B1U - IAAT_ELECO -
27 HHSearch 47.1728% -77 - C3 -1L6H - NLTPX_ORYSJ -
34 HHSearch 46.8720%-108 - C3 -3OB4 - ? -


User Run . : Multi Template Modeling Result:

(4 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]
44 96.84100%-138 - C- -M044 - -
45 95.84100%-144 - C- -M045 - -
46 91.62100%-145 - C- -M046 - -
41 90.81100%-128 - C- -M041 - -