@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : new_query: (2014-05-06 )
LTCGQVSSNLAPCIAYVRGGGAVPPACCNGIRNINNLAKTTADRQTACNCLKQLSASVPGVNANNAAALPGKCGVNVPYKISPSTNCATVK

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]




OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]




11 HHSearch 93.3088%-122 - C2 -2ALG 3.6 NLTP1_PRUPE
14 HHSearch 84.9156%-114 - C2 -1T12 - NLTP1_TOBAC -
31 SP3 84.3457%-113 - C2 -1FK5 5.3 NLTP_MAIZE
13 HHSearch 81.1659%-111 - C2 -1SIY - NLTP1_VIGRR -
16 HHSearch 78.0944%-122 - C2 -1BWO - NLTP1_WHEAT -
12 HHSearch 76.9857%-105 - C2 -1AFH - NLTP_MAIZE -
26 HHSearch 59.0530%-134 - C2 -1SM7 - ? -
28 HHSearch 58.8223%-143 - C2 -1HSS - IAA1_WHEAT -
24 HHSearch 56.4525%-138 - C2 -1BEA - ITRF_MAIZE -
40 SP3 56.1620%-140 * C2 *1HSS - IAA1_WHEAT -
30 HHSearch 55.2221%-106 - C2 -1W2Q - CONG_ARAHY -
29 HHSearch 50.6121% -91 - C2 -2LVF - ? -
17 HHSearch 49.5824% -97 - C2 -2RKN - DIRL1_ARATH -
23 HHSearch 49.1723% -85 - C2 -1PSY - 2SS_RICCO -
22 HHSearch 48.7520%-124 - C2 -1B1U - IAAT_ELECO -
7 Fugue 46.2120% -84 - C2 -1S6D - 2SS8_HELAN -
2 Fugue 45.8427% -82 - C2 -2RKN - DIRL1_ARATH -
5 Fugue 44.5326% -74 - C2 -1L6H - NLTPX_ORYSJ -
25 HHSearch 43.8226% -76 - C2 -3OB4 - ? -
34 SP3 42.8521% -67 - C2 -1L6H - NLTPX_ORYSJ -


User Run . : Multi Template Modeling Result:

(4 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]




OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]




41 96.41100%-131 - C- -M041 - -
47 95.04100%-123 - C- -M047 - -
42 92.85100%-122 - C- -M042 - -
45 92.83100%-123 - C- -M045 - -