@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : new_query: (2014-05-06 )
AVSCGQVVNNLTPCINYVANGGALNPSCCTGVRSLYSLAQTTADRQSICNCLKQAVNGIPYTNANAGLAAGLPGKCGVNIPYKISPSTDCKSIK

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]
22 HHSearch 95.2256%-140 - C2 -1T12 - NLTP1_TOBAC -
21 HHSearch 93.9757%-141 - C2 -2ALG 3.7 NLTP1_PRUPE
25 HHSearch 93.4153%-146 - C2 -1SIY - NLTP1_VIGRR -
11 SP3 89.2853%-132 - C2 -1FK5 5.9 NLTP_MAIZE
23 HHSearch 86.1054%-134 - C2 -1AFH - NLTP_MAIZE -
26 HHSearch 85.4644%-136 - C2 -1BWO - NLTP1_WHEAT -
36 HHSearch 64.8225%-143 - C2 -1SM7 - ? -
3 Fugue 57.2722%-104 - C2 -1S6D - 2SS8_HELAN -
34 HHSearch 56.8026%-120 - C2 -1BEA - ITRF_MAIZE -
39 HHSearch 55.2219%-124 - C2 -1W2Q - CONG_ARAHY -
17 SP3 53.2017%-130 - C2 -1HSS - IAA1_WHEAT -
41 HHSearch 52.3917%-146 * C2 *1HSS - IAA1_WHEAT -
27 HHSearch 51.9723%-113 - C2 -2RKN - DIRL1_ARATH -
33 HHSearch 48.3217%-115 - C2 -1B1U - IAAT_ELECO -
2 Fugue 46.7224% -78 - C2 -2RKN - DIRL1_ARATH -
37 HHSearch 44.9519%-107 - C2 -1S6D - 2SS8_HELAN -
10 Fugue 43.9215% -87 - C2 -1W2Q - CONG_ARAHY -
40 HHSearch 42.6919% -92 - C2 -2LVF - ? -
4 Fugue 42.2518% -51 - C2 -1PSY - 2SS_RICCO -
35 HHSearch 41.9920%-111 - C2 -3OB4 - ? -


User Run . : Multi Template Modeling Result:

(4 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]
49 39.21100% 12 - C- -M049 - -
46 35.28100% -27 - C- -M046 - -
47 34.12100% -13 - C- -M047 - -
43 31.55100% -13 - C- -M043 - -