@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : new_query: (2014-05-06 )
ITCGQVSSNLAPCIPYVRVGGAVPPACCNGIRNVNNLARTTPDRQAACNCLKQLSASVPGVNPNNAAALPGKCGVHIPYKISASTNCATV

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]



OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]
21 HHSearch 91.8097%-124 - C2 -2ALG 3.4 NLTP1_PRUPE
22 HHSearch 80.5356%-116 - C2 -1T12 - NLTP1_TOBAC -
11 SP3 79.0458%-113 - C2 -1FK5 5.6 NLTP_MAIZE
25 HHSearch 77.6444%-116 - C2 -1BWO - NLTP1_WHEAT -
24 HHSearch 76.9661%-114 - C2 -1SIY - NLTP1_VIGRR -
23 HHSearch 76.1659%-110 - C2 -1AFH - NLTP_MAIZE -
16 SP3 62.4323%-163 - C2 -1HSS - IAA1_WHEAT -
36 HHSearch 60.9130%-127 - C2 -1SM7 - ? -
39 HHSearch 55.7427%-145 * C2 *1HSS - IAA1_WHEAT -
34 HHSearch 53.5822%-132 - C2 -1BEA - ITRF_MAIZE -
40 HHSearch 48.0121%-100 - C2 -1W2Q - CONG_ARAHY -
38 HHSearch 46.7021% -90 - C2 -2LVF - ? -
6 Fugue 46.2822% -72 - C2 -1PSY - 2SS_RICCO -
27 HHSearch 45.9229% -88 - C2 -2RKN - DIRL1_ARATH -
32 HHSearch 45.8119%-125 - C2 -1B1U - IAAT_ELECO -
35 HHSearch 45.6023% -74 - C2 -1PSY - 2SS_RICCO -
8 Fugue 43.0421% -95 - C2 -1S6D - 2SS8_HELAN -
33 HHSearch 42.7026% -82 - C2 -3OB4 - ? -
3 Fugue 41.9723% -81 - C2 -1L6H - NLTPX_ORYSJ -
13 SP3 41.4021% -76 - C2 -1L6H - NLTPX_ORYSJ -


User Run . : Multi Template Modeling Result:

(3 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]



OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]
46 92.70100%-129 - C- -M046 - -
47 92.55100%-133 - C- -M047 - -
42 90.32100%-130 - C- -M042 - -