@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : new_query: (2014-05-06 )
ITCGQVSSSLAPCIPYVRGGGAVPPACCNGIRNVNNLARTTPDRQAACNCLKQLSASVPGVNPNNAAALPGKCGVSIPYKISASTNCATVK

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]



OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]
21 HHSearch 93.32100%-124 - C2 -2ALG 3.4 NLTP1_PRUPE
11 SP3 83.4660%-109 - C2 -1FK5 5.5 NLTP_MAIZE
23 HHSearch 82.0454%-118 - C2 -1T12 - NLTP1_TOBAC -
26 HHSearch 80.9646%-121 - C2 -1BWO - NLTP1_WHEAT -
24 HHSearch 78.9159%-116 - C2 -1SIY - NLTP1_VIGRR -
22 HHSearch 78.0560%-110 - C2 -1AFH - NLTP_MAIZE -
39 HHSearch 61.4325%-142 - C2 -1HSS - IAA1_WHEAT -
34 HHSearch 61.2530%-127 - C2 -1SM7 - ? -
19 SP3 58.9223%-144 - C2 -1HSS - IAA1_WHEAT -
33 HHSearch 55.5924%-136 - C2 -1BEA - ITRF_MAIZE -
38 HHSearch 48.7823% -92 - C2 -2LVF - ? -
32 HHSearch 47.9919%-121 - C2 -1B1U - IAAT_ELECO -
27 HHSearch 46.9929% -89 - C2 -2RKN - DIRL1_ARATH -
3 Fugue 46.3824% -84 - C2 -1L6H - NLTPX_ORYSJ -
35 HHSearch 46.1023% -76 - C2 -1PSY - 2SS_RICCO -
13 SP3 45.1321% -78 - C2 -1L6H - NLTPX_ORYSJ -
14 SP3 44.4616%-106 - C2 -1QPO - NADC_MYCTU -
2 Fugue 44.2328% -82 - C2 -2RKN - DIRL1_ARATH -
7 Fugue 43.5621% -92 - C2 -1S6D - 2SS8_HELAN -
36 HHSearch 43.4626% -81 - C2 -3OB4 - ? -


User Run . : Multi Template Modeling Result:

(4 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]



OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]
44 95.06100%-133 - C- -M044 - -
41 93.54100%-136 - C- -M041 - -
40 93.47100%-126 - C- -M040 - -
45 93.31100%-122 - C- -M045 - -