@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : new_query: (2014-05-06 )
ITCGQVSSALAPCIPYVRGGGAVPPACCNGIRNVNNLARTTPDRQAACNCLKQLSASVPGVNPNNAAALPGKCGVHIPYKISASTNCATVK

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]
21 HHSearch 93.7398%-130 - C2 -2ALG 3.4 NLTP1_PRUPE
11 SP3 84.7660%-113 - C2 -1FK5 5.5 NLTP_MAIZE
23 HHSearch 82.3654%-123 - C2 -1T12 - NLTP1_TOBAC -
26 HHSearch 80.4646%-127 - C2 -1BWO - NLTP1_WHEAT -
22 HHSearch 78.8560%-115 - C2 -1AFH - NLTP_MAIZE -
24 HHSearch 78.7459%-120 - C2 -1SIY - NLTP1_VIGRR -
39 HHSearch 60.7127%-148 - C2 -1HSS - IAA1_WHEAT -
34 HHSearch 60.6030%-132 - C2 -1SM7 - ? -
19 SP3 59.5624%-151 - C2 -1HSS - IAA1_WHEAT -
33 HHSearch 55.3822%-140 - C2 -1BEA - ITRF_MAIZE -
38 HHSearch 50.1921%-102 - C2 -2LVF - ? -
32 HHSearch 47.7419%-130 - C2 -1B1U - IAAT_ELECO -
35 HHSearch 47.2923%-103 - C2 -1PSY - 2SS_RICCO -
40 HHSearch 47.2620% -98 - C2 -1W2Q - CONG_ARAHY -
27 HHSearch 47.1429%-103 - C2 -2RKN - DIRL1_ARATH -
3 Fugue 46.6724% -90 - C2 -1L6H - NLTPX_ORYSJ -
6 Fugue 45.9222% -83 - C2 -1PSY - 2SS_RICCO -
13 SP3 44.8921% -84 - C2 -1L6H - NLTPX_ORYSJ -
14 SP3 44.3115%-109 - C2 -1QPO - NADC_MYCTU -
9 Fugue 44.1321% -98 - C2 -1S6D - 2SS8_HELAN -


User Run . : Multi Template Modeling Result:

(4 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]
45 93.70100%-137 - C- -M045 - -
48 92.12100%-125 - C- -M048 - -
47 92.10100%-134 - C- -M047 - -
42 91.98100%-135 - C- -M042 - -