@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : new_query: (2014-05-06 )
ITCSQVSANLAPCINYVRSGGAVPPACCNGIKTINGLAKTTPDRQAACNCLKNLAGSVSGVNPGNAESLPGKCGVNVPYKISTSTNCATVK

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]



LPC_A_4(1BWO)
NLTP1_WHEAT
[Raw transfer]
11 HHSearch 93.0778%-118 - C2 -2ALG 3.6 NLTP1_PRUPE
13 HHSearch 86.0556%-114 - C2 -1T12 - NLTP1_TOBAC -
14 HHSearch 85.0860%-114 - C2 -1SIY - NLTP1_VIGRR -
31 SP3 83.4556%-112 - C2 -1FK5 5.5 NLTP_MAIZE
16 HHSearch 82.7643%-122 - C2 -1BWO 4.7 NLTP1_WHEAT
12 HHSearch 78.9556% -98 - C2 -1AFH - NLTP_MAIZE -
39 SP3 61.6219%-133 - C2 -1HSS - IAA1_WHEAT -
24 HHSearch 61.0925%-123 - C2 -1BEA - ITRF_MAIZE -
26 HHSearch 58.9930%-117 - C2 -1SM7 - ? -
29 HHSearch 55.5023%-149 * C2 *1HSS - IAA1_WHEAT -
28 HHSearch 51.0721%-100 - C2 -2LVF - ? -
30 HHSearch 50.8921% -98 - C2 -1W2Q - CONG_ARAHY -
10 Fugue 47.8121%-120 - C2 -1HSS - IAA1_WHEAT -
35 SP3 47.6016%-112 - C2 -1QPO - NADC_MYCTU -
23 HHSearch 45.2420% -99 - C2 -1B1U - IAAT_ELECO -
6 Fugue 43.4822% -19 - C2 -1PSY - 2SS_RICCO -
17 HHSearch 43.4023% -80 - C2 -2RKN - DIRL1_ARATH -
9 Fugue 43.3021% -92 - C2 -1S6D - 2SS8_HELAN -
22 HHSearch 42.8026% -75 - C2 -1PSY - 2SS_RICCO -
37 SP3 41.7516%-112 - C2 -1QPO - NADC_MYCTU -


User Run . : Multi Template Modeling Result:

(3 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]



LPC_A_4(1BWO)
NLTP1_WHEAT
[Raw transfer]
41 92.55100%-120 - C- -M041 - -
42 90.88100%-120 - C- -M042 - -
48 88.28100%-112 - C- -M048 - -