@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : new_query: (2014-05-06 )
ITCGQVVSNLTPCITYLQRGGAVPGQCCNGVKTLVSSAQTTADKQTACNCLKSTAATIPNINFGNAGSLPGKCGVNLPYKISPSTNCASIKF

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]



OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



LPC_A_3(1BWO)
NLTP1_WHEAT
[Raw transfer]



LPC_A_4(1BWO)
NLTP1_WHEAT
[Raw transfer]
14 HHSearch 97.3761%-117 - C4 -1T12 - NLTP1_TOBAC -
12 HHSearch 95.7460%-117 - C4 -2ALG 4.1 NLTP1_PRUPE
15 HHSearch 95.6658%-116 - C4 -1SIY - NLTP1_VIGRR -
32 SP3 92.3750%-116 - C4 -1FK5 4.8 NLTP_MAIZE
16 HHSearch 92.3651%-126 - C4 -1BWO 6.5 NLTP1_WHEAT
13 HHSearch 83.3551%-104 - C4 -1AFH - NLTP_MAIZE -
26 HHSearch 64.7325%-119 - C4 -1SM7 - ? -
30 HHSearch 57.8520%-117 * C4 *1HSS - IAA1_WHEAT -
25 HHSearch 57.1419%-110 - C4 -1BEA - ITRF_MAIZE -
8 Fugue 53.5327% -56 - C4 -1PSY - 2SS_RICCO -
7 Fugue 53.4622% -82 - C4 -1S6D - 2SS8_HELAN -
22 HHSearch 50.6014% -95 - C4 -1B1U - IAAT_ELECO -
23 HHSearch 50.3321% -77 - C4 -1S6D - 2SS8_HELAN -
31 HHSearch 49.6421% -87 - C4 -1W2Q - CONG_ARAHY -
5 Fugue 49.2923% -26 - C1 -4D8O - ANK2_HUMAN -
29 HHSearch 49.2218% -53 - C4 -2LVF - ? -
24 HHSearch 48.8228% -57 - C4 -1PSY - 2SS_RICCO -
34 SP3 47.2114% -89 * C5 *1QPO - NADC_MYCTU -
17 HHSearch 45.6820% -80 - C4 -2RKN - DIRL1_ARATH -
18 HHSearch 44.9429% -58 - C4 -1L6H - NLTPX_ORYSJ -


User Run . : Multi Template Modeling Result:

(4 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]



OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



LPC_A_3(1BWO)
NLTP1_WHEAT
[Raw transfer]



LPC_A_4(1BWO)
NLTP1_WHEAT
[Raw transfer]
43 99.44100%-127 - C- -M043 - -
42 98.42100%-119 - C- -M042 - -
45 98.21100%-123 - C- -M045 - -
46 96.01100%-114 - C- -M046 - -