@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : new_query: (2014-05-06 )
ITCGQVASSLGPCLNYLKGAGGTAPSAACCNGVRGINSAAKTTADRQTACQCLKSAANGIPGLQPKLAESLPGNCNVNIPYKISLSTNCQSIK

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]



LPC_A_4(1BWO)
NLTP1_WHEAT
[Raw transfer]
17 HHSearch 94.6856%-132 - C4 -1T12 - NLTP1_TOBAC -
11 SP3 94.3454%-114 - C4 -1FK5 4.1 NLTP_MAIZE
19 HHSearch 92.4658%-121 - C4 -2ALG 4.1 NLTP1_PRUPE
18 HHSearch 91.1155%-108 - C4 -1AFH - NLTP_MAIZE -
22 HHSearch 90.3846%-128 - C4 -1BWO 4.4 NLTP1_WHEAT
21 HHSearch 89.0752%-124 - C4 -1SIY - NLTP1_VIGRR -
33 HHSearch 66.7226%-126 - C4 -1SM7 - ? -
27 HHSearch 66.4626%-137 - C4 -1BEA - ITRF_MAIZE -
35 HHSearch 63.9623%-140 * C4 *1HSS - IAA1_WHEAT -
26 HHSearch 53.6821% -87 - C4 -1B1U - IAAT_ELECO -
6 Fugue 52.3823% -82 - C4 -1S6D - 2SS8_HELAN -
23 HHSearch 50.9627% -84 - C4 -2RKN - DIRL1_ARATH -
36 HHSearch 50.9419%-105 - C4 -1W2Q - CONG_ARAHY -
29 HHSearch 50.5121%-100 - C4 -1S6D - 2SS8_HELAN -
5 Fugue 49.2516% -57 - C4 -4HR1 - ? -
2 Fugue 47.0329% -59 - C4 -2RKN - DIRL1_ARATH -
32 HHSearch 42.9222% -70 - C4 -1PSY - 2SS_RICCO -
3 Fugue 39.7926% -81 - C4 -1L6H - NLTPX_ORYSJ -
31 HHSearch 39.0522% -76 - C4 -3OB4 - ? -
8 Fugue 37.7313% -56 - C4 -1W2Q - CONG_ARAHY -


User Run . : Multi Template Modeling Result:

(3 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]



LPC_A_4(1BWO)
NLTP1_WHEAT
[Raw transfer]
37 93.91100%-124 - C- -M037 - -
43 92.65100%-125 - C- -M043 - -
44 92.44100%-126 - C- -M044 - -