@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : 364_tI_RUBID: (2014-05-06 )
ITCGQVTQNVAPCFNYVKNGGAVPAACCNGVRNLNSQAKTTADRQQTCNCLKNAAGSIPGLNPSLAAGLPGKCGVSVPYKISTSTNCATVK

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]




DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]




LPC_A_3(1BWO)
NLTP1_WHEAT
[Raw transfer]




LPC_A_4(1BWO)
NLTP1_WHEAT
[Raw transfer]




1 HHSearch 96.0569%-106 - C4 -2ALG 3.7 NLTP1_PRUPE
31 SP3 88.8857%-108 - C4 -1FK5 5.4 NLTP_MAIZE
4 HHSearch 86.8958%-100 - C4 -1T12 - NLTP1_TOBAC -
3 HHSearch 86.0755%-106 - C4 -1SIY - NLTP1_VIGRR -
6 HHSearch 84.8547%-116 - C4 -1BWO 6.7 NLTP1_WHEAT
2 HHSearch 83.6357% -95 - C4 -1AFH - NLTP_MAIZE -
16 HHSearch 67.1729%-129 - C4 -1SM7 - ? -
20 HHSearch 58.9417%-121 - C4 -1HSS - IAA1_WHEAT -
13 HHSearch 57.9121%-103 - C4 -1BEA - ITRF_MAIZE -
38 SP3 57.6817%-113 * C4 *1HSS - IAA1_WHEAT -
7 HHSearch 51.9226% -90 - C4 -2RKN - DIRL1_ARATH -
12 HHSearch 48.1324% -60 - C4 -1PSY - 2SS_RICCO -
22 Fugue 47.2124% -66 - C4 -2RKN - DIRL1_ARATH -
19 HHSearch 46.2123% -79 - C4 -2LVF - ? -
27 Fugue 44.9419% -29 - C4 -1PSY - 2SS_RICCO -
14 HHSearch 44.1717% -86 - C4 -1B1U - IAAT_ELECO -
17 HHSearch 41.7720% -93 - C4 -1S6D - 2SS8_HELAN -
33 SP3 41.5219% -74 - C4 -1L6H - NLTPX_ORYSJ -
23 Fugue 40.8821% -79 - C4 -1L6H - NLTPX_ORYSJ -
9 HHSearch 40.0125% -87 - C4 -1N89 - NLT2G_WHEAT -


User Run . : Multi Template Modeling Result:

(5 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]




DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]




LPC_A_3(1BWO)
NLTP1_WHEAT
[Raw transfer]




LPC_A_4(1BWO)
NLTP1_WHEAT
[Raw transfer]




47 97.64100%-116 - C- -M047 - -
45 97.23100%-123 - C- -M045 - -
42 96.08100%-113 - C- -M042 - -
41 94.76100%-117 - C- -M041 - -
43 88.84100%-107 - C- -M043 - -