@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : new_query: (2014-05-06 )
ALGCGSVISYLSPCLPYVTNRGPLGGCCNGVKGLYGAARSTPDRQAACNCLKSLAATSGNINLSKAAGLPKQCNVNIPYQISPSTDCTKVR

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]



LPC_A_3(1BWO)
NLTP1_WHEAT
[Raw transfer]



LPC_A_4(1BWO)
NLTP1_WHEAT
[Raw transfer]
11 HHSearch 96.4164%-140 - C3 -1T12 - NLTP1_TOBAC -
32 SP3 82.5151%-126 - C3 -1FK5 5.6 NLTP_MAIZE
16 HHSearch 81.2649%-132 - C3 -1BWO 6.8 NLTP1_WHEAT
15 HHSearch 80.7641%-133 - C3 -1SIY - NLTP1_VIGRR -
12 HHSearch 79.1751%-118 - C3 -1AFH - NLTP_MAIZE -
13 HHSearch 77.9052%-135 - C3 -2ALG 3.9 NLTP1_PRUPE
23 HHSearch 57.6127%-163 - C3 -1BEA - ITRF_MAIZE -
30 HHSearch 54.8021%-147 * C3 *1HSS - IAA1_WHEAT -
27 HHSearch 49.5325%-134 - C3 -1S6D - 2SS8_HELAN -
25 HHSearch 49.3027%-115 - C3 -1SM7 - ? -
21 HHSearch 48.1719%-129 - C3 -1B1U - IAAT_ELECO -
31 HHSearch 48.1619%-122 - C3 -1W2Q - CONG_ARAHY -
28 HHSearch 48.1123%-108 - C3 -2LVF - ? -
24 HHSearch 47.6121%-112 - C3 -3OB4 - ? -
10 Fugue 46.4725%-116 - C3 -1S6D - 2SS8_HELAN -
34 SP3 45.9520% -84 - C3 -1QPO - NADC_MYCTU -
36 SP3 44.4420% -84 - C3 -1QPO - NADC_MYCTU -
8 Fugue 43.1713% -94 - C3 -1BM9 - RTP_BACSU -
2 Fugue 40.8927% -80 - C3 -2RKN - DIRL1_ARATH -
17 HHSearch 40.7527% -94 - C3 -2RKN - DIRL1_ARATH -


User Run . : Multi Template Modeling Result:

(4 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]



LPC_A_3(1BWO)
NLTP1_WHEAT
[Raw transfer]



LPC_A_4(1BWO)
NLTP1_WHEAT
[Raw transfer]
44 96.81100%-152 - C- -M044 - -
45 95.41100%-149 - C- -M045 - -
48 93.05100%-149 - C- -M048 - -
46 90.25100%-136 - C- -M046 - -