@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : new_query: (2014-05-06 )
AISCGQVNSALGPCISYARGSGANTSAACCSGVKRLAGSVRTSDDKKAACLCIKRAAGGLNPGKAADIPTKCRVTIPYKISSNVNCNNLH

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



HP6_G_7(2ALG)
NLTP1_PRUPE
[Raw transfer]



LPC_A_4(1BWO)
NLTP1_WHEAT
[Raw transfer]
25 HHSearch 90.9944%-119 - C4 -1BWO 3.7 NLTP1_WHEAT
11 SP3 90.3058%-110 - C4 -1FK5 6.4 NLTP_MAIZE
21 HHSearch 87.5852%-113 - C4 -1T12 - NLTP1_TOBAC -
20 HHSearch 85.9759%-112 - C4 -1AFH - NLTP_MAIZE -
24 HHSearch 85.9445%-114 - C4 -1SIY - NLTP1_VIGRR -
23 HHSearch 81.7147%-111 - C4 -2ALG 2.4 NLTP1_PRUPE
32 HHSearch 62.2021%-128 - C4 -1BEA - ITRF_MAIZE -
35 HHSearch 57.8921%-108 - C4 -1SM7 - ? -
4 Fugue 57.1826% -76 - C4 -1PSY - 2SS_RICCO -
34 HHSearch 53.6430% -83 - C4 -1PSY - 2SS_RICCO -
36 HHSearch 52.1922%-122 - C4 -1S6D - 2SS8_HELAN -
3 Fugue 51.1929%-100 - C4 -1L6H - NLTPX_ORYSJ -
2 Fugue 50.1824% -85 - C4 -2RKN - DIRL1_ARATH -
10 Fugue 49.7023% -89 - C4 -1S6D - 2SS8_HELAN -
31 HHSearch 48.4016% -95 - C4 -1B1U - IAAT_ELECO -
26 HHSearch 42.7820% -72 - C4 -2RKN - DIRL1_ARATH -
33 HHSearch 42.7515% -73 - C4 -3OB4 - ? -
28 HHSearch 38.4626% -64 - C4 -1N89 - NLT2G_WHEAT -
27 HHSearch 37.4426% -86 - C4 -1L6H - NLTPX_ORYSJ -
12 SP3 32.8214% -36 * C3 *1EHX - ? -


User Run . : Multi Template Modeling Result:

(4 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



HP6_G_7(2ALG)
NLTP1_PRUPE
[Raw transfer]



LPC_A_4(1BWO)
NLTP1_WHEAT
[Raw transfer]
44 91.23100%-112 - C- -M044 - -
42 90.74100%-114 - C- -M042 - -
39 40.41100% - - C- -M039 - -
40 32.24100% 31 - C- -M040 - -