@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : new_query: (2014-05-07 )
AISCGTVANDLSPCINYVMYGGAGTPPVPCCTGIKTLYNQASSTADRQAVCGCLKSVAGQASPAIIGTAAALPGKCGVSIPYEISPSTDCSKVH

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]
13 HHSearch 98.4256%-137 - C3 -1T12 - NLTP1_TOBAC -
32 SP3 92.5754%-129 - C3 -1FK5 5.8 NLTP_MAIZE
12 HHSearch 92.5252%-134 - C3 -2ALG 3.8 NLTP1_PRUPE
15 HHSearch 90.2248%-125 - C3 -1SIY - NLTP1_VIGRR -
11 HHSearch 89.8454%-129 - C3 -1AFH - NLTP_MAIZE -
16 HHSearch 86.8546%-130 - C3 -1BWO - NLTP1_WHEAT -
28 HHSearch 61.8323%-128 - C3 -1SM7 - ? -
31 HHSearch 59.3221%-144 * C3 *1HSS - IAA1_WHEAT -
29 HHSearch 59.2017%-135 - C3 -1W2Q - CONG_ARAHY -
20 HHSearch 56.0426%-140 - C3 -1BEA - ITRF_MAIZE -
17 HHSearch 54.7829%-112 - C3 -2RKN - DIRL1_ARATH -
3 Fugue 54.5617% -80 - C3 -1PSY - 2SS_RICCO -
22 HHSearch 54.4422%-128 - C3 -1S6D - 2SS8_HELAN -
4 Fugue 53.4518%-104 - C3 -1W2Q - CONG_ARAHY -
21 HHSearch 52.8315%-133 - C3 -1B1U - IAAT_ELECO -
24 HHSearch 51.2922%-109 - C3 -2LVF - ? -
5 Fugue 50.5319% -84 - C3 -1S6D - 2SS8_HELAN -
2 Fugue 50.3628% -97 - C3 -2RKN - DIRL1_ARATH -
27 HHSearch 49.0718%-122 - C3 -3OB4 - ? -
26 HHSearch 45.9724% -93 - C3 -1PSY - 2SS_RICCO -


User Run . : Multi Template Modeling Result:

(4 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]
45 45.92100% - - C- -M045 - -
41 45.92100% - - C- -M041 - -
47 33.63100% 3 - C- -M047 - -
48 32.21100% 14 - C- -M048 - -