@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : new_query: (2014-05-07 )
ALTCGQVTSSLFSCLPYLRNTGPLGDCCSGVKKLKGQAQTTADRQTACNCLKSTAGSIKGLNFGKAASLPSTCSVNIPYEISPSTDCSKVQ

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]



LPC_A_3(1BWO)
NLTP1_WHEAT
[Raw transfer]



LPC_A_4(1BWO)
NLTP1_WHEAT
[Raw transfer]
11 HHSearch 93.7875%-113 - C5 -1T12 - NLTP1_TOBAC -
12 HHSearch 84.8651%-103 - C5 -2ALG 3.8 NLTP1_PRUPE
16 HHSearch 84.2849%-111 - C5 -1BWO 6.6 NLTP1_WHEAT
32 SP3 83.5357%-102 - C5 -1FK5 4.7 NLTP_MAIZE
15 HHSearch 81.1446%-101 - C5 -1SIY - NLTP1_VIGRR -
13 HHSearch 76.9657% -93 - C5 -1AFH - NLTP_MAIZE -
23 HHSearch 57.4126%-147 - C5 -1BEA - ITRF_MAIZE -
24 HHSearch 54.5627%-110 - C5 -1SM7 - ? -
21 HHSearch 47.8821%-127 - C5 -1B1U - IAAT_ELECO -
2 Fugue 47.0724% -73 - C5 -2RKN - DIRL1_ARATH -
17 HHSearch 46.6123% -76 - C5 -2RKN - DIRL1_ARATH -
7 Fugue 45.8425% -26 - C5 -1PSY - 2SS_RICCO -
29 HHSearch 45.7117% -81 - C5 -1W2Q - CONG_ARAHY -
28 HHSearch 45.3422%-110 - C5 -1S6D - 2SS8_HELAN -
26 HHSearch 44.1931% -71 - C5 -1PSY - 2SS_RICCO -
8 Fugue 42.5613% -52 - C5 -1W2Q - CONG_ARAHY -
25 HHSearch 40.2918% -70 - C5 -3OB4 - ? -
4 Fugue 36.0222% -88 - C5 -1L6H - NLTPX_ORYSJ -
19 HHSearch 33.0724% -50 - C5 -1N89 - NLT2G_WHEAT -
18 HHSearch 33.0328% -70 - C5 -1L6H - NLTPX_ORYSJ -


User Run . : Multi Template Modeling Result:

(4 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]



LPC_A_3(1BWO)
NLTP1_WHEAT
[Raw transfer]



LPC_A_4(1BWO)
NLTP1_WHEAT
[Raw transfer]
40 92.19100%-116 - C- -M040 - -
42 92.10100%-102 - C- -M042 - -
39 91.89100%-118 - C- -M039 - -
36 91.12100%-117 - C- -M036 - -