@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : 375_tI_SOLCI: (2014-05-07 )
LTCGQVTSTLAPCLPYLMNRGPLGGCCGGVKGLLGQAQTTVDRQAACACLKSAASSFTDLDLGKAASLPSTCNVNIPYKISPSTDCSKVQ

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]




DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]




LPC_A_3(1BWO)
NLTP1_WHEAT
[Raw transfer]




LPC_A_4(1BWO)
NLTP1_WHEAT
[Raw transfer]




1 HHSearch 95.8374%-140 - C3 -1T12 - NLTP1_TOBAC -
4 HHSearch 83.2547%-132 - C3 -1SIY - NLTP1_VIGRR -
32 SP3 81.9655%-130 - C3 -1FK5 6.0 NLTP_MAIZE
3 HHSearch 80.9356%-118 - C3 -1AFH - NLTP_MAIZE -
2 HHSearch 79.4350%-130 - C3 -2ALG 3.9 NLTP1_PRUPE
6 HHSearch 78.2247%-132 - C3 -1BWO 6.6 NLTP1_WHEAT
20 HHSearch 67.4227%-172 - C3 -1HSS - IAA1_WHEAT -
13 HHSearch 56.5826%-166 - C3 -1BEA - ITRF_MAIZE -
14 HHSearch 52.9527%-132 - C3 -1SM7 - ? -
16 HHSearch 47.9827% -86 - C3 -1PSY - 2SS_RICCO -
7 HHSearch 47.0625% -95 - C3 -2RKN - DIRL1_ARATH -
17 HHSearch 46.7327%-134 - C3 -1S6D - 2SS8_HELAN -
30 Fugue 46.5427%-102 * C3 *1S6D - 2SS8_HELAN -
27 Fugue 46.4825% -80 - C3 -1PSY - 2SS_RICCO -
23 Fugue 45.3623% -89 - C3 -2RKN - DIRL1_ARATH -
11 HHSearch 43.2617%-140 - C3 -1B1U - IAAT_ELECO -
15 HHSearch 42.2717%-111 - C3 -3OB4 - ? -
28 Fugue 40.0813%-104 - C3 -1D8J - T2EB_HUMAN -
26 Fugue 39.8918% -74 - C3 -1W2Q - CONG_ARAHY -
31 Fugue 37.6617% -54 - C3 -1UG7 - AIDA_MOUSE -


User Run . : Multi Template Modeling Result:

(5 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]




DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]




LPC_A_3(1BWO)
NLTP1_WHEAT
[Raw transfer]




LPC_A_4(1BWO)
NLTP1_WHEAT
[Raw transfer]




46 95.83100%-144 - C- -M046 - -
40 95.39100%-139 - C- -M040 - -
45 92.53100%-139 - C- -M045 - -
41 92.27100%-149 - C- -M041 - -
43 90.81100%-143 - C- -M043 - -