@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : new_query: (2014-05-07 )
LSCGEVTSGLAPCLPYLEGRGPLGGCCGGVKGLLGAAKTPEDRKTACTCLKSAANSIKGIDTGKAAGLPGVCGVNIPYKISPSTDCSTVQ

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]



LPC_A_4(1BWO)
NLTP1_WHEAT
[Raw transfer]
10 HHSearch 95.4472%-126 - C3 -1T12 - NLTP1_TOBAC -
13 HHSearch 84.6847%-110 - C3 -1SIY - NLTP1_VIGRR -
11 HHSearch 83.4350%-123 - C3 -2ALG 3.9 NLTP1_PRUPE
30 SP3 82.9654%-118 * C3 *1FK5 5.6 NLTP_MAIZE
12 HHSearch 81.0154%-100 - C3 -1AFH - NLTP_MAIZE -
15 HHSearch 79.9047%-117 - C3 -1BWO 4.2 NLTP1_WHEAT
23 HHSearch 61.1729%-111 - C3 -1SM7 - ? -
22 HHSearch 56.0726%-158 - C3 -1BEA - ITRF_MAIZE -
27 HHSearch 49.5827%-107 - C3 -1S6D - 2SS8_HELAN -
9 Fugue 49.0827% -86 - C3 -1S6D - 2SS8_HELAN -
25 HHSearch 47.8930% -84 - C3 -1PSY - 2SS_RICCO -
28 HHSearch 47.6917%-104 - C3 -1W2Q - CONG_ARAHY -
24 HHSearch 45.2820% -91 - C3 -3OB4 - ? -
3 Fugue 44.3620% -95 - C3 -1L6H - NLTPX_ORYSJ -
2 Fugue 43.7026% -67 - C3 -2RKN - DIRL1_ARATH -
16 HHSearch 43.4826% -71 - C3 -2RKN - DIRL1_ARATH -
20 HHSearch 43.0017%-139 - C3 -1B1U - IAAT_ELECO -
19 HHSearch 36.5831% -72 - C3 -1PNB - ? -
7 Fugue 35.9616% -50 - C3 -1W2Q - CONG_ARAHY -
17 HHSearch 33.3323% -77 - C3 -1L6H - NLTPX_ORYSJ -


User Run . : Multi Template Modeling Result:

(5 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]



LPC_A_4(1BWO)
NLTP1_WHEAT
[Raw transfer]
34 95.71100%-136 - C- -M034 - -
36 94.37100%-125 - C- -M036 - -
37 94.03100%-129 - C- -M037 - -
35 93.17100%-137 - C- -M035 - -
39 91.78100%-135 - C- -M039 - -