@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : new_query: (2014-05-07 )
LTCGQVTSTLAPCLPYLMNRGPLGGCCGGVKGLLGQAQTTVDRQTACTCLKSAASSFTGLDLGKAASLPSTCSVNIPYKISPSTDCSKVQ

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]



OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



LPC_A_3(1BWO)
NLTP1_WHEAT
[Raw transfer]



LPC_A_4(1BWO)
NLTP1_WHEAT
[Raw transfer]
19 HHSearch 95.9577%-135 - C4 -1T12 - NLTP1_TOBAC -
22 HHSearch 81.3947%-126 - C4 -1SIY - NLTP1_VIGRR -
20 HHSearch 80.4550%-126 - C4 -2ALG 3.9 NLTP1_PRUPE
11 SP3 80.3155%-129 - C4 -1FK5 6.0 NLTP_MAIZE
21 HHSearch 80.2656%-115 - C4 -1AFH - NLTP_MAIZE -
24 HHSearch 76.5847%-129 - C4 -1BWO 7.0 NLTP1_WHEAT
32 HHSearch 57.3026%-159 - C4 -1BEA - ITRF_MAIZE -
31 HHSearch 54.9527%-128 - C4 -1SM7 - ? -
9 Fugue 46.8024%-106 - C4 -1S6D - 2SS8_HELAN -
34 HHSearch 46.4227% -99 * C4 *1PSY - 2SS_RICCO -
37 HHSearch 46.3320%-125 - C4 -1W2Q - CONG_ARAHY -
35 HHSearch 45.7325%-128 - C4 -1S6D - 2SS8_HELAN -
7 Fugue 43.3625% -74 - C4 -1PSY - 2SS_RICCO -
25 HHSearch 43.3426% -92 - C4 -2RKN - DIRL1_ARATH -
29 HHSearch 41.9917%-133 - C4 -1B1U - IAAT_ELECO -
2 Fugue 41.8925% -86 - C4 -2RKN - DIRL1_ARATH -
33 HHSearch 41.5119% -98 - C4 -3OB4 - ? -
3 Fugue 40.9219%-108 - C4 -1L6H - NLTPX_ORYSJ -
10 Fugue 40.4413%-107 - C4 -1D8J - T2EB_HUMAN -
5 Fugue 39.0422% -74 - C4 -1W2Q - CONG_ARAHY -


User Run . : Multi Template Modeling Result:

(5 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]



OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



LPC_A_3(1BWO)
NLTP1_WHEAT
[Raw transfer]



LPC_A_4(1BWO)
NLTP1_WHEAT
[Raw transfer]
44 96.79100%-142 - C- -M044 - -
45 96.15100%-149 - C- -M045 - -
46 95.89100%-136 - C- -M046 - -
40 94.13100%-134 - C- -M040 - -
41 93.69100%-143 - C- -M041 - -