@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : new_query: (2014-05-07 )
LTCGQVTSSLAPCFPYLMNRGPLGGCCGGVKSLLGQAQTTADRQTACTCLKSAASSFTGLDLGKAAGLPSACSVNIPYKISPSTDCSKVQ

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]



LPC_A_4(1BWO)
NLTP1_WHEAT
[Raw transfer]
14 HHSearch 95.0576%-135 - C3 -1T12 - NLTP1_TOBAC -
10 SP3 78.6056%-127 - C3 -1FK5 6.1 NLTP_MAIZE
15 HHSearch 78.3551%-128 - C3 -2ALG 3.9 NLTP1_PRUPE
17 HHSearch 77.1648%-126 - C3 -1SIY - NLTP1_VIGRR -
16 HHSearch 75.7557%-116 - C3 -1AFH - NLTP_MAIZE -
19 HHSearch 74.3345%-128 - C3 -1BWO 3.0 NLTP1_WHEAT
32 HHSearch 55.2027%-164 * C3 *1HSS - IAA1_WHEAT -
27 HHSearch 54.4926%-158 - C3 -1BEA - ITRF_MAIZE -
26 HHSearch 51.2527%-132 - C3 -1SM7 - ? -
9 Fugue 44.7124%-105 - C3 -1S6D - 2SS8_HELAN -
29 HHSearch 44.0929% -91 - C3 -1PSY - 2SS_RICCO -
30 HHSearch 41.7925%-125 - C3 -1S6D - 2SS8_HELAN -
24 HHSearch 41.6217%-131 - C3 -1B1U - IAAT_ELECO -
28 HHSearch 40.4019%-101 - C3 -3OB4 - ? -
34 HHSearch 39.5022% -92 - C3 -2LVF - ? -
5 Fugue 39.2316% -69 - C3 -1W2Q - CONG_ARAHY -
3 Fugue 38.7320%-105 - C3 -1L6H - NLTPX_ORYSJ -
20 HHSearch 38.0025% -85 - C3 -2RKN - DIRL1_ARATH -
2 Fugue 37.7526% -79 - C3 -2RKN - DIRL1_ARATH -
21 HHSearch 34.4220% -82 - C3 -1L6H - NLTPX_ORYSJ -


User Run . : Multi Template Modeling Result:

(3 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]



LPC_A_4(1BWO)
NLTP1_WHEAT
[Raw transfer]
35 94.12100%-145 - C- -M035 - -
36 91.54100%-132 - C- -M036 - -
42 89.95100%-137 - C- -M042 - -