@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : new_query: (2014-05-07 )
LSCGEVTSGLAPCLPYLQGRGPIGGCCGGVKGLLGAAKTPEDRKTACTCLKSAANSIKGIDTGKAVGLPGVCGVSIPYKISPSTDCSKVQ

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]




HP6_G_7(2ALG)
NLTP1_PRUPE
[Raw transfer]




LPC_A_4(1BWO)
NLTP1_WHEAT
[Raw transfer]




15 HHSearch 94.6270%-127 - C3 -1T12 - NLTP1_TOBAC -
17 HHSearch 83.5749%-126 - C3 -2ALG 2.8 NLTP1_PRUPE
18 HHSearch 83.0547%-114 - C3 -1SIY - NLTP1_VIGRR -
11 SP3 81.4954%-119 - C3 -1FK5 5.7 NLTP_MAIZE
16 HHSearch 78.0554%-102 - C3 -1AFH - NLTP_MAIZE -
20 HHSearch 76.1747%-117 - C3 -1BWO 4.3 NLTP1_WHEAT
34 HHSearch 65.4825%-158 - C3 -1HSS - IAA1_WHEAT -
10 Fugue 59.1427% -91 - C3 -1S6D - 2SS8_HELAN -
28 HHSearch 55.2524%-157 - C3 -1BEA - ITRF_MAIZE -
27 HHSearch 55.1029%-120 - C3 -1SM7 - ? -
5 Fugue 49.3018% -77 - C3 -2A10 - CCMK4_SYNY3 -
31 HHSearch 48.3827%-113 - C3 -1S6D - 2SS8_HELAN -
30 HHSearch 47.9728% -98 - C3 -1PSY - 2SS_RICCO -
25 HHSearch 47.0517%-147 - C3 -1B1U - IAAT_ELECO -
21 HHSearch 42.8926% -72 - C3 -2RKN - DIRL1_ARATH -
2 Fugue 41.7326% -68 - C3 -2RKN - DIRL1_ARATH -
29 HHSearch 41.4621% -87 - C3 -3OB4 - ? -
3 Fugue 40.1320%-101 - C3 -1L6H - NLTPX_ORYSJ -
8 Fugue 34.8516% -55 - C3 -1W2Q - CONG_ARAHY -
22 HHSearch 33.5523% -82 - C3 -1L6H - NLTPX_ORYSJ -


User Run . : Multi Template Modeling Result:

(4 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]




HP6_G_7(2ALG)
NLTP1_PRUPE
[Raw transfer]




LPC_A_4(1BWO)
NLTP1_WHEAT
[Raw transfer]




36 96.09100%-138 - C- -M036 - -
42 93.74100%-128 - C- -M042 - -
37 93.03100%-121 - C- -M037 - -
38 90.25100%-130 - C- -M038 - -