@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : new_query: (2014-05-07 )
LSCGQVTSGLAPCLPYLQGRGPIGGCCGGIKGLLGAAKTPADRKTACTCLKSAASAIKGINVGKAAGIPRLCGVNIPYKISPSTDCSKVR

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]



LPC_A_4(1BWO)
NLTP1_WHEAT
[Raw transfer]
11 HHSearch 94.3471%-136 - C2 -1T12 - NLTP1_TOBAC -
14 HHSearch 84.6549%-130 - C2 -1SIY - NLTP1_VIGRR -
12 HHSearch 82.8549%-132 - C2 -2ALG 3.9 NLTP1_PRUPE
16 HHSearch 82.3048%-129 - C2 -1BWO 4.4 NLTP1_WHEAT
31 SP3 81.2757%-127 - C2 -1FK5 4.9 NLTP_MAIZE
13 HHSearch 77.0658%-110 - C2 -1AFH - NLTP_MAIZE -
23 HHSearch 56.1024%-174 - C2 -1BEA - ITRF_MAIZE -
24 HHSearch 49.7424%-125 - C2 -1SM7 - ? -
29 HHSearch 47.9115%-123 - C2 -1W2Q - CONG_ARAHY -
21 HHSearch 46.6217%-151 - C2 -1B1U - IAAT_ELECO -
9 Fugue 46.0520% -78 - C2 -2A10 - CCMK4_SYNY3 -
26 HHSearch 45.5827% -95 - C2 -1PSY - 2SS_RICCO -
17 HHSearch 45.3024%-113 - C2 -2RKN - DIRL1_ARATH -
28 HHSearch 44.3623%-121 - C2 -1S6D - 2SS8_HELAN -
25 HHSearch 44.0919% -95 * C2 *3OB4 - ? -
2 Fugue 42.8525% -84 - C2 -2RKN - DIRL1_ARATH -
7 Fugue 40.2324%-104 - C2 -1S6D - 2SS8_HELAN -
3 Fugue 39.7822%-103 - C2 -1L6H - NLTPX_ORYSJ -
6 Fugue 36.9618% -68 - C2 -1W2Q - CONG_ARAHY -
19 HHSearch 35.8829% -67 - C2 -1N89 - NLT2G_WHEAT -


User Run . : Multi Template Modeling Result:

(5 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]



LPC_A_4(1BWO)
NLTP1_WHEAT
[Raw transfer]
40 93.42100%-147 - C- -M040 - -
42 93.16100%-137 - C- -M042 - -
41 92.97100%-135 - C- -M041 - -
46 92.31100%-150 - C- -M046 - -
43 91.44100%-138 - C- -M043 - -