@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : new_query: (2014-05-07 )
LSCGEVTSGLAPCLPYLQGRGPIGGCCGGVKGLLGAAKTPEDRKTACTCLKSAANSIKGIDTGKAAGLPGVCGVSIPYKISPSTDCSKVQ

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]



LPC_A_4(1BWO)
NLTP1_WHEAT
[Raw transfer]
10 HHSearch 94.1771%-127 - C3 -1T12 - NLTP1_TOBAC -
13 HHSearch 84.0847%-113 - C3 -1SIY - NLTP1_VIGRR -
12 HHSearch 82.9950%-124 - C3 -2ALG 3.9 NLTP1_PRUPE
31 SP3 82.0755%-119 - C3 -1FK5 5.7 NLTP_MAIZE
11 HHSearch 78.5456%-102 - C3 -1AFH - NLTP_MAIZE -
15 HHSearch 78.0547%-117 - C3 -1BWO 4.3 NLTP1_WHEAT
28 HHSearch 67.8427%-160 * C3 *1HSS - IAA1_WHEAT -
9 Fugue 57.9627% -91 - C3 -1S6D - 2SS8_HELAN -
23 HHSearch 56.2126%-155 - C3 -1BEA - ITRF_MAIZE -
22 HHSearch 54.8329%-115 - C3 -1SM7 - ? -
25 HHSearch 50.6926%-106 - C3 -1PSY - 2SS_RICCO -
26 HHSearch 47.9927%-114 - C3 -1S6D - 2SS8_HELAN -
30 HHSearch 46.5423%-104 - C3 -2LVF - ? -
20 HHSearch 44.2017%-138 - C3 -1B1U - IAAT_ELECO -
24 HHSearch 43.8221% -87 - C3 -3OB4 - ? -
2 Fugue 43.1226% -66 - C3 -2RKN - DIRL1_ARATH -
16 HHSearch 42.9126% -71 - C3 -2RKN - DIRL1_ARATH -
3 Fugue 40.3620%-102 - C3 -1L6H - NLTPX_ORYSJ -
7 Fugue 39.2021% -56 - C3 -3UUN - DMD_HUMAN -
8 Fugue 34.8116% -54 - C3 -1W2Q - CONG_ARAHY -


User Run . : Multi Template Modeling Result:

(4 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]



LPC_A_4(1BWO)
NLTP1_WHEAT
[Raw transfer]
36 92.99100%-133 - C- -M036 - -
41 92.94100%-131 - C- -M041 - -
39 92.31100%-130 - C- -M039 - -
35 87.34100%-124 - C- -M035 - -