@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : new_query: (2014-05-07 )
LSCGQVTSGLAPCLPYLQGRGPIGGCCGGIKGLLGAAKTPADRKTACTCLKSAASAIKGINVGKAAGIPRVCGVNIPYKISPSTDCSKVR

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]



LPC_A_4(1BWO)
NLTP1_WHEAT
[Raw transfer]
9 HHSearch 94.0571%-136 - C2 -1T12 - NLTP1_TOBAC -
12 HHSearch 84.5449%-129 - C2 -1SIY - NLTP1_VIGRR -
29 SP3 83.4157%-127 - C2 -1FK5 4.9 NLTP_MAIZE
11 HHSearch 82.3549%-132 - C2 -2ALG 3.9 NLTP1_PRUPE
14 HHSearch 82.0849%-126 - C2 -1BWO 4.4 NLTP1_WHEAT
10 HHSearch 77.3658%-109 - C2 -1AFH - NLTP_MAIZE -
21 HHSearch 55.6724%-173 - C2 -1BEA - ITRF_MAIZE -
22 HHSearch 49.9726%-123 - C2 -1SM7 - ? -
27 HHSearch 46.6415%-123 - C2 -1W2Q - CONG_ARAHY -
19 HHSearch 45.7117%-149 - C2 -1B1U - IAAT_ELECO -
24 HHSearch 44.4826%-101 - C2 -1PSY - 2SS_RICCO -
26 HHSearch 44.4023%-120 - C2 -1S6D - 2SS8_HELAN -
15 HHSearch 44.0324%-111 - C2 -2RKN - DIRL1_ARATH -
23 HHSearch 43.4618% -98 * C2 *3OB4 - ? -
2 Fugue 42.8025% -83 - C2 -2RKN - DIRL1_ARATH -
7 Fugue 40.2324%-103 - C2 -1S6D - 2SS8_HELAN -
3 Fugue 39.4622%-103 - C2 -1L6H - NLTPX_ORYSJ -
6 Fugue 36.4618% -68 - C2 -1W2Q - CONG_ARAHY -
17 HHSearch 35.6129% -67 - C2 -1N89 - NLT2G_WHEAT -
18 HHSearch 32.4427% -94 - C2 -1PNB - ? -


User Run . : Multi Template Modeling Result:

(5 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]



LPC_A_4(1BWO)
NLTP1_WHEAT
[Raw transfer]
40 94.56100%-145 - C- -M040 - -
38 93.99100%-152 - C- -M038 - -
37 93.23100%-131 - C- -M037 - -
44 92.81100%-144 - C- -M044 - -
41 91.97100%-137 - C- -M041 - -