@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : new_query: (2014-05-07 )
AISCGQVSSAIALCLSYARGQGFAPSAGCCSGVRSLNSAARTTADRRAACNCLKNAARGISGLNAGNAASIPSKCGVSVPYTISTSTDCSRVS

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]



LPC_A_3(1BWO)
NLTP1_WHEAT
[Raw transfer]



LPC_A_4(1BWO)
NLTP1_WHEAT
[Raw transfer]
28 SP3 93.7289%-108 - C2 -1FK5 5.4 NLTP_MAIZE
10 HHSearch 89.1889%-114 - C2 -1AFH - NLTP_MAIZE -
15 HHSearch 85.6558%-118 - C2 -1BWO 6.8 NLTP1_WHEAT
11 HHSearch 83.8859%-113 - C2 -1T12 - NLTP1_TOBAC -
13 HHSearch 82.8455%-114 - C2 -2ALG 3.8 NLTP1_PRUPE
14 HHSearch 76.4946%-118 - C2 -1SIY - NLTP1_VIGRR -
34 SP3 58.6818%-126 - C2 -1HSS - IAA1_WHEAT -
23 HHSearch 54.5322%-147 - C2 -1BEA - ITRF_MAIZE -
25 HHSearch 53.8623%-127 - C2 -1SM7 - ? -
26 HHSearch 52.0927% -92 - C2 -1PSY - 2SS_RICCO -
5 Fugue 49.9224% -77 - C2 -1PSY - 2SS_RICCO -
8 Fugue 49.2917% -84 - C2 -1S6D - 2SS8_HELAN -
35 SP3 49.2118%-117 - C2 -1QPO - NADC_MYCTU -
3 Fugue 47.4027%-112 - C2 -1L6H - NLTPX_ORYSJ -
6 Fugue 46.0624% -50 - C2 -4HLB - ? -
22 HHSearch 44.7515%-110 - C2 -1S6D - 2SS8_HELAN -
16 HHSearch 44.4620% -99 - C2 -2RKN - DIRL1_ARATH -
31 SP3 43.8117%-105 - C2 -1QPO - NADC_MYCTU -
21 HHSearch 43.7617%-108 * C2 *1B1U - IAAT_ELECO -
2 Fugue 43.3322% -80 - C2 -2RKN - DIRL1_ARATH -


User Run . : Multi Template Modeling Result:

(3 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]



LPC_A_3(1BWO)
NLTP1_WHEAT
[Raw transfer]



LPC_A_4(1BWO)
NLTP1_WHEAT
[Raw transfer]
38 93.83100%-115 - C- -M038 - -
42 91.98100%-120 - C- -M042 - -
44 90.68100%-115 - C- -M044 - -