@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : new_query: (2014-05-07 )
ATTSEAAVTCGQVSSAIGPCLSYARGQGSGPSAGCCSGVRSLNSAARTTADRRAACNCLKNAARGIRGLNVGKAASIPSKCGVSIPYTISTSTDCSRVS

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]



LPC_A_3(1BWO)
NLTP1_WHEAT
[Raw transfer]



LPC_A_4(1BWO)
NLTP1_WHEAT
[Raw transfer]
29 SP3 93.7281%-101 - C2 -1FK5 5.7 NLTP_MAIZE
11 HHSearch 88.8787%-110 - C2 -1AFH - NLTP_MAIZE -
15 HHSearch 83.8658%-106 - C2 -1BWO 6.6 NLTP1_WHEAT
12 HHSearch 83.5160%-106 - C2 -1T12 - NLTP1_TOBAC -
14 HHSearch 81.2254%-106 - C2 -2ALG 3.7 NLTP1_PRUPE
16 HHSearch 76.2747%-108 - C2 -1SIY - NLTP1_VIGRR -
23 HHSearch 56.0122%-139 - C2 -1BEA - ITRF_MAIZE -
26 HHSearch 52.9225%-102 - C2 -1SM7 - ? -
3 Fugue 49.2725% -59 - C2 -1PSY - 2SS_RICCO -
7 Fugue 47.8517% -64 - C2 -1S6D - 2SS8_HELAN -
22 HHSearch 47.3217% -96 - C2 -1B1U - IAAT_ELECO -
27 HHSearch 45.5825% -79 - C2 -1PSY - 2SS_RICCO -
17 HHSearch 45.3019% -86 - C2 -2RKN - DIRL1_ARATH -
25 HHSearch 43.7715%-103 - C2 -1S6D - 2SS8_HELAN -
4 Fugue 43.2224% -95 - C2 -1L6H - NLTPX_ORYSJ -
2 Fugue 42.3523% -68 - C2 -2RKN - DIRL1_ARATH -
38 SP3 38.5811% -62 - C2 -1B0A - FOLD_ECOLI -
24 HHSearch 38.2020% -72 - C2 -3OB4 - ? -
31 SP3 37.6121% -52 - C2 -1L6H - NLTPX_ORYSJ -
18 HHSearch 36.8128% -68 - C2 -1L6H - NLTPX_ORYSJ -


User Run . : Multi Template Modeling Result:

(3 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]



LPC_A_3(1BWO)
NLTP1_WHEAT
[Raw transfer]



LPC_A_4(1BWO)
NLTP1_WHEAT
[Raw transfer]
41 44.17100% -23 - C- -M041 - -
45 43.35100% -16 - C- -M045 - -
39 42.19100% -17 - C- -M039 - -