@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : new_query: (2014-05-07 )
AISCGTVASSLAPCAGYLTKGGAVPAPCCAGVSKLNGMAKTTPDRQQACKCLKAAAQSINPSLASGLPGKCGVSIPYPISMSTNCDNVK

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]
15 HHSearch 93.7661%-126 - C5 -2ALG 3.9 NLTP1_PRUPE
19 HHSearch 92.9055%-130 - C5 -1SIY - NLTP1_VIGRR -
17 HHSearch 91.8556%-125 - C5 -1T12 - NLTP1_TOBAC -
11 SP3 90.0455%-122 - C5 -1FK5 5.4 NLTP_MAIZE
16 HHSearch 89.5955%-110 - C5 -1AFH - NLTP_MAIZE -
20 HHSearch 86.6743%-124 - C5 -1BWO - NLTP1_WHEAT -
31 HHSearch 66.1527%-138 - C5 -1SM7 - ? -
21 HHSearch 58.2026% -95 - C5 -2RKN - DIRL1_ARATH -
9 Fugue 56.9822% -69 - C5 -1PSY - 2SS_RICCO -
2 Fugue 56.1728% -71 - C5 -2RKN - DIRL1_ARATH -
3 Fugue 55.8122% -68 - C5 -2A10 - CCMK4_SYNY3 -
27 HHSearch 54.9920%-131 - C5 -1BEA - ITRF_MAIZE -
26 HHSearch 54.4324%-109 - C5 -1S6D - 2SS8_HELAN -
6 Fugue 53.9629% -81 - C5 -1L6H - NLTPX_ORYSJ -
29 HHSearch 53.4122% -76 - C5 -1PSY - 2SS_RICCO -
22 HHSearch 48.2730% -79 - C5 -1L6H - NLTPX_ORYSJ -
25 HHSearch 48.0915%-111 - C5 -1B1U - IAAT_ELECO -
23 HHSearch 45.6734% -73 - C5 -1N89 - NLT2G_WHEAT -
12 SP3 40.9914% -74 - C4 -1EHX - ? -
14 SP3 32.418% -44 - C5 -1HCR - -


User Run . : Multi Template Modeling Result:

(4 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]
33 98.56100%-132 - C- -M033 - -
39 97.47100%-139 - C- -M039 - -
34 95.66100%-142 - C- -M034 - -
37 92.04100%-137 - C- -M037 - -