@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : new_query: (2014-05-07 )
AITCGQVASALSPCISYLQKGGAVPPACCSGIKSLNSSAKTTADRQAACKCLKNFSSTVSGINLSLASGLPGKCGVSVPYKISPSTDCTKVT

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]



LPC_A_4(1BWO)
NLTP1_WHEAT
[Raw transfer]
11 HHSearch 96.1763%-127 - C3 -2ALG 3.7 NLTP1_PRUPE
15 HHSearch 92.8256%-131 - C3 -1SIY - NLTP1_VIGRR -
29 SP3 92.0959%-126 - C3 -1FK5 5.2 NLTP_MAIZE
13 HHSearch 89.6860%-122 - C3 -1T12 - NLTP1_TOBAC -
16 HHSearch 87.2043%-132 - C3 -1BWO 3.5 NLTP1_WHEAT
12 HHSearch 85.2460%-114 - C3 -1AFH - NLTP_MAIZE -
24 HHSearch 60.4322%-131 - C3 -1SM7 - ? -
32 SP3 59.9018%-148 - C3 -1HSS - IAA1_WHEAT -
23 HHSearch 55.8717%-151 - C3 -1BEA - ITRF_MAIZE -
26 HHSearch 52.9025% -92 - C3 -1PSY - 2SS_RICCO -
6 Fugue 52.8220% -47 - C3 -1PSY - 2SS_RICCO -
22 HHSearch 50.1116%-123 - C3 -1B1U - IAAT_ELECO -
17 HHSearch 48.7924%-102 - C3 -2RKN - DIRL1_ARATH -
7 Fugue 47.9023% -61 - C3 -1S6D - 2SS8_HELAN -
28 HHSearch 47.6417% -93 - C3 -1W2Q - CONG_ARAHY -
2 Fugue 45.1827% -84 - C3 -2RKN - DIRL1_ARATH -
38 SP3 44.4521% -71 - C2 -1BS0 - BIOF_ECOLI -
3 Fugue 43.9918% -63 - C3 -1HSS - IAA1_WHEAT -
31 SP3 42.6719% -89 - C3 -1L6H - NLTPX_ORYSJ -
19 HHSearch 42.4030% -82 - C3 -1N89 - NLT2G_WHEAT -


User Run . : Multi Template Modeling Result:

(5 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]



LPC_A_4(1BWO)
NLTP1_WHEAT
[Raw transfer]
45 96.88100%-139 - C- -M045 - -
39 95.75100%-136 - C- -M039 - -
43 94.87100%-137 - C- -M043 - -
40 93.33100%-141 - C- -M040 - -
44 92.65100%-139 - C- -M044 - -