@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : new_query: (2014-05-07 )
AITCGQVSSALSSCLGYLKNGGAVPPGCCSGIKNLNSAAQTTADRQAACKCLKTFSNSIPGINLGLASGLPGKCGVSVPYKISPSTDCSKVT

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]



OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]
11 HHSearch 93.9763%-129 - C2 -2ALG 3.7 NLTP1_PRUPE
32 SP3 90.3855%-124 - C2 -1FK5 4.4 NLTP_MAIZE
13 HHSearch 89.1563%-126 - C2 -1T12 - NLTP1_TOBAC -
16 HHSearch 88.1244%-134 - C2 -1BWO - NLTP1_WHEAT -
15 HHSearch 87.7153%-127 - C2 -1SIY - NLTP1_VIGRR -
12 HHSearch 83.0155%-118 - C2 -1AFH - NLTP_MAIZE -
36 SP3 63.7820%-150 - C2 -1HSS - IAA1_WHEAT -
6 Fugue 60.8026%-104 - C2 -1S6D - 2SS8_HELAN -
31 HHSearch 59.9320%-157 * C2 *1HSS - IAA1_WHEAT -
24 HHSearch 57.5921%-152 - C2 -1BEA - ITRF_MAIZE -
22 HHSearch 56.7625%-114 - C2 -2LVF - ? -
26 HHSearch 56.2325%-133 - C2 -1S6D - 2SS8_HELAN -
25 HHSearch 53.8824%-131 - C2 -1SM7 - ? -
17 HHSearch 51.4624%-102 - C2 -2RKN - DIRL1_ARATH -
20 HHSearch 49.0416%-126 - C2 -1B1U - IAAT_ELECO -
2 Fugue 46.1025% -78 - C2 -2RKN - DIRL1_ARATH -
28 HHSearch 45.9926% -85 - C2 -1PSY - 2SS_RICCO -
3 Fugue 45.4720% -96 - C2 -1L6H - NLTPX_ORYSJ -
30 HHSearch 43.8017% -95 - C2 -1W2Q - CONG_ARAHY -
8 Fugue 41.9021% -47 - C2 -1PSY - 2SS_RICCO -


User Run . : Multi Template Modeling Result:

(4 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]



OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]
49 96.75100%-144 - C- -M049 - -
46 95.37100%-135 - C- -M046 - -
42 95.37100%-135 - C- -M042 - -
48 92.60100%-144 - C- -M048 - -