@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : new_query: (2014-05-07 )
LSCGDVATQMASCINYLRGAGPLPAACCNGVKNLKNSATTTQDRRTACKCLISASKTISGVNFGLAAGLPAKCGVSIPYKISPSTNCDQVN

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]
32 SP3 95.4757%-122 - C2 -1FK5 5.7 NLTP_MAIZE
11 HHSearch 89.2157%-120 - C2 -1AFH - NLTP_MAIZE -
14 HHSearch 88.5958%-122 - C2 -1T12 - NLTP1_TOBAC -
12 HHSearch 88.0856%-125 - C2 -2ALG 3.6 NLTP1_PRUPE
13 HHSearch 84.8551%-119 - C2 -1SIY - NLTP1_VIGRR -
16 HHSearch 82.1939%-128 - C2 -1BWO - NLTP1_WHEAT -
31 HHSearch 60.7623%-163 * C2 *1HSS - IAA1_WHEAT -
24 HHSearch 60.1925%-134 - C2 -1SM7 - ? -
25 HHSearch 59.9227%-143 - C2 -1BEA - ITRF_MAIZE -
8 Fugue 56.6421%-118 - C2 -1S6D - 2SS8_HELAN -
40 SP3 54.7517%-147 - C2 -1HSS - IAA1_WHEAT -
23 HHSearch 52.1621%-122 - C2 -1S6D - 2SS8_HELAN -
22 HHSearch 51.2719%-131 - C2 -1B1U - IAAT_ELECO -
17 HHSearch 50.5723%-111 - C2 -2RKN - DIRL1_ARATH -
27 HHSearch 49.5526% -81 - C2 -1PSY - 2SS_RICCO -
30 HHSearch 47.5323%-109 - C2 -2LVF - ? -
2 Fugue 47.4024% -84 - C2 -2RKN - DIRL1_ARATH -
5 Fugue 46.1722% -75 - C2 -1PSY - 2SS_RICCO -
41 SP3 46.1618% -92 - C2 -1QPO - NADC_MYCTU -
3 Fugue 45.5726%-111 - C2 -1L6H - NLTPX_ORYSJ -


User Run . : Multi Template Modeling Result:

(4 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]
46 95.63100%-137 - C- -M046 - -
49 95.24100%-146 - C- -M049 - -
48 95.01100%-134 - C- -M048 - -
47 94.80100%-144 - C- -M047 - -