@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : new_query: (2014-05-07 )
LSCGDVATQLAPCINYLRSAGPLPVACCNGVKNLKNSAATTQDRRTACKCLINASKSISGVNFGLAAGLPGKCGVNIPYKISPSTNCDQVN

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]
31 SP3 93.5756%-122 - C2 -1FK5 5.5 NLTP_MAIZE
11 HHSearch 92.2258%-123 - C2 -2ALG 3.6 NLTP1_PRUPE
14 HHSearch 91.6460%-123 - C2 -1T12 - NLTP1_TOBAC -
13 HHSearch 90.7254%-116 - C2 -1SIY - NLTP1_VIGRR -
12 HHSearch 88.5756%-118 - C2 -1AFH - NLTP_MAIZE -
16 HHSearch 82.3940%-123 - C2 -1BWO - NLTP1_WHEAT -
25 HHSearch 63.5229%-128 - C2 -1SM7 - ? -
23 HHSearch 53.9824%-134 - C2 -1BEA - ITRF_MAIZE -
29 HHSearch 53.8825%-161 * C2 *1HSS - IAA1_WHEAT -
40 SP3 53.3019%-139 - C2 -1HSS - IAA1_WHEAT -
27 HHSearch 49.9923%-106 - C2 -1S6D - 2SS8_HELAN -
17 HHSearch 49.1125%-109 - C2 -2RKN - DIRL1_ARATH -
30 HHSearch 47.0123% -97 - C2 -2LVF - ? -
3 Fugue 45.9524% -80 - C2 -2RKN - DIRL1_ARATH -
36 SP3 45.2215% -92 - C2 -1QPO - NADC_MYCTU -
22 HHSearch 45.1417%-126 - C2 -1B1U - IAAT_ELECO -
19 HHSearch 44.5723%-108 - C2 -1N89 - NLT2G_WHEAT -
9 Fugue 43.9113% -62 - C2 -1W2Q - CONG_ARAHY -
26 HHSearch 43.5426% -75 - C2 -1PSY - 2SS_RICCO -
18 HHSearch 43.3023% -96 - C2 -1L6H - NLTPX_ORYSJ -


User Run . : Multi Template Modeling Result:

(5 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]
48 97.72100%-154 - C- -M048 - -
42 96.81100%-148 - C- -M042 - -
41 95.94100%-138 - C- -M041 - -
47 95.04100%-138 - C- -M047 - -
45 93.23100%-132 - C- -M045 - -