@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : new_query: (2014-05-07 )
ITCSDVNKALAPCVSYLTGGGAPTSACCDGVRTLKSLSPTTSDRQTACQCAKDAASRNPNIREDAAAALPNKCGVQTDIPISRSTDCST

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



HP6_G_7(2ALG)
NLTP1_PRUPE
[Raw transfer]
22 HHSearch 92.1549% -94 - C2 -2ALG 2.6 NLTP1_PRUPE
11 SP3 90.9847% -86 - C2 -1FK5 5.1 NLTP_MAIZE
21 HHSearch 90.7149% -87 - C2 -1T12 - NLTP1_TOBAC -
26 HHSearch 89.2044% -87 * C2 *1BWO - NLTP1_WHEAT -
23 HHSearch 88.2947% -83 - C2 -1AFH - NLTP_MAIZE -
24 HHSearch 82.1142% -87 - C2 -1SIY - NLTP1_VIGRR -
36 HHSearch 60.7224% -87 - C2 -1SM7 - ? -
32 HHSearch 59.6622%-104 - C2 -1BEA - ITRF_MAIZE -
38 HHSearch 58.4118% -85 - C2 -1HSS - IAA1_WHEAT -
14 SP3 56.0621% -84 - C2 -1QPO - NADC_MYCTU -
5 Fugue 53.1220% -69 - C2 -1S6D - 2SS8_HELAN -
40 HHSearch 53.0217% -59 - C2 -1W2Q - CONG_ARAHY -
39 HHSearch 51.5720% -98 - C2 -1S6D - 2SS8_HELAN -
27 HHSearch 50.5420% -91 - C2 -2RKN - DIRL1_ARATH -
2 Fugue 50.3020% -76 - C2 -2RKN - DIRL1_ARATH -
34 HHSearch 48.7123% -56 - C2 -1PSY - 2SS_RICCO -
29 HHSearch 45.5332% -49 - C2 -1N89 - NLT2G_WHEAT -
35 HHSearch 45.1214% -79 - C2 -1B1U - IAAT_ELECO -
4 Fugue 44.3714% -44 - C2 -1W2Q - CONG_ARAHY -
28 HHSearch 44.2833% -62 - C2 -1L6H - NLTPX_ORYSJ -


User Run . : Multi Template Modeling Result:

(3 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



HP6_G_7(2ALG)
NLTP1_PRUPE
[Raw transfer]
41 97.56100% -97 - C- -M041 - -
42 96.15100% -91 - C- -M042 - -
43 95.89100%-100 - C- -M043 - -