@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : new_query: (2014-05-07 )
TVTCGQVASALSPCISYLQKGGAVPAGCCSGIKSLNSAAKTTGDRQAACKCLKTFSSSVSGINYGLASGLPGKCGVSVPYKISPSTDCSKVT

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]



LPC_A_4(1BWO)
NLTP1_WHEAT
[Raw transfer]
21 HHSearch 95.5761%-126 - C3 -2ALG 3.7 NLTP1_PRUPE
11 SP3 93.1260%-123 - C3 -1FK5 5.1 NLTP_MAIZE
24 HHSearch 91.4953%-129 - C3 -1SIY - NLTP1_VIGRR -
26 HHSearch 88.6143%-128 - C3 -1BWO 3.2 NLTP1_WHEAT
23 HHSearch 87.9558%-120 - C3 -1T12 - NLTP1_TOBAC -
22 HHSearch 86.0961%-114 - C3 -1AFH - NLTP_MAIZE -
15 SP3 62.0618%-150 - C3 -1HSS - IAA1_WHEAT -
8 Fugue 61.8124%-105 - C3 -1S6D - 2SS8_HELAN -
34 HHSearch 60.4027%-134 - C3 -1SM7 - ? -
41 HHSearch 58.3120%-158 - C3 -1HSS - IAA1_WHEAT -
39 HHSearch 57.8425%-109 - C3 -2LVF - ? -
5 Fugue 57.2121%-123 - C3 -1HSS - IAA1_WHEAT -
37 HHSearch 55.5425% -90 - C3 -1PSY - 2SS_RICCO -
35 HHSearch 55.5025%-125 - C3 -1S6D - 2SS8_HELAN -
33 HHSearch 54.3719%-161 - C3 -1BEA - ITRF_MAIZE -
40 HHSearch 53.6318%-101 - C3 -1W2Q - CONG_ARAHY -
32 HHSearch 51.3217%-129 - C3 -1B1U - IAAT_ELECO -
27 HHSearch 50.9024% -93 - C3 -2RKN - DIRL1_ARATH -
2 Fugue 50.1824% -83 - C3 -2RKN - DIRL1_ARATH -
3 Fugue 48.3126% -94 - C3 -1L6H - NLTPX_ORYSJ -


User Run . : Multi Template Modeling Result:

(4 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]



LPC_A_4(1BWO)
NLTP1_WHEAT
[Raw transfer]
43 98.25100%-144 - C- -M043 - -
46 97.12100%-138 - C- -M046 - -
49 96.87100%-145 - C- -M049 - -
48 93.78100%-141 - C- -M048 - -