@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : new_query: (2014-05-07 )
AISCGQVASAIAPCISYARGQGSAPSAGCCSGVKSLNNAARTTADRRAACNCLKNAAAGVSGLNAGNAASIPSKCGVSIPYTISTSTDCSRVN

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]




DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]




LPC_A_3(1BWO)
NLTP1_WHEAT
[Raw transfer]




LPC_A_4(1BWO)
NLTP1_WHEAT
[Raw transfer]




30 SP3 95.9697%-109 - C3 -1FK5 5.9 NLTP_MAIZE
11 HHSearch 91.3798%-112 - C3 -1AFH - NLTP_MAIZE -
12 HHSearch 86.6562%-116 - C3 -1T12 - NLTP1_TOBAC -
16 HHSearch 85.4958%-113 - C3 -1BWO 6.4 NLTP1_WHEAT
14 HHSearch 80.3759%-113 - C3 -2ALG 3.7 NLTP1_PRUPE
15 HHSearch 78.3152%-116 - C3 -1SIY - NLTP1_VIGRR -
20 HHSearch 53.9822%-137 - C3 -1BEA - ITRF_MAIZE -
32 SP3 53.9019%-119 - C3 -1HSS - IAA1_WHEAT -
27 HHSearch 53.0928% -91 - C3 -1PSY - 2SS_RICCO -
25 HHSearch 53.0425%-105 - C3 -1SM7 - ? -
4 Fugue 52.2124% -45 - C3 -1PSY - 2SS_RICCO -
3 Fugue 47.4631% -99 - C3 -1L6H - NLTPX_ORYSJ -
26 HHSearch 45.8820% -75 - C3 -3OB4 - ? -
22 HHSearch 45.7016%-105 - C3 -1S6D - 2SS8_HELAN -
2 Fugue 44.5122% -79 - C3 -2RKN - DIRL1_ARATH -
17 HHSearch 44.1320% -91 - C3 -2RKN - DIRL1_ARATH -
24 HHSearch 43.3018% -98 - C3 -1B1U - IAAT_ELECO -
31 SP3 41.7621% -80 - C3 -1L6H - NLTPX_ORYSJ -
8 Fugue 39.1615% -59 - C3 -2D5R - TOB1_HUMAN -
7 Fugue 38.6213% -52 - C3 -1W2Q - CONG_ARAHY -


User Run . : Multi Template Modeling Result:

(4 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]




DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]




LPC_A_3(1BWO)
NLTP1_WHEAT
[Raw transfer]




LPC_A_4(1BWO)
NLTP1_WHEAT
[Raw transfer]




44 95.60100%-118 - C- -M044 - -
40 95.38100%-119 - C- -M040 - -
43 91.80100%-120 - C- -M043 - -
41 89.44100%-113 - C- -M041 - -