@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : new_query: (2014-05-07 )
AISCGQVASAIAPCISYARGQGSGPSAGCCSGVRSLNNAARTTADRRAACNCLKNAAAGVSGLNAGNAASIPSKCSVSIPYTISTSTDCSRVN

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]



LPC_A_3(1BWO)
NLTP1_WHEAT
[Raw transfer]



LPC_A_4(1BWO)
NLTP1_WHEAT
[Raw transfer]
29 SP3 95.4898%-109 - C2 -1FK5 5.7 NLTP_MAIZE
11 HHSearch 91.6899%-114 - C2 -1AFH - NLTP_MAIZE -
12 HHSearch 82.0659%-117 - C2 -1T12 - NLTP1_TOBAC -
16 HHSearch 81.7757%-111 - C2 -1BWO 6.4 NLTP1_WHEAT
14 HHSearch 78.1158%-114 - C2 -2ALG 3.7 NLTP1_PRUPE
15 HHSearch 77.7349%-118 - C2 -1SIY - NLTP1_VIGRR -
23 HHSearch 52.3922%-140 - C2 -1BEA - ITRF_MAIZE -
25 HHSearch 51.5425%-106 - C2 -1SM7 - ? -
32 SP3 51.2519%-120 - C2 -1HSS - IAA1_WHEAT -
4 Fugue 48.0824% -45 - C2 -1PSY - 2SS_RICCO -
27 HHSearch 47.4125% -90 - C2 -1PSY - 2SS_RICCO -
3 Fugue 47.0231%-103 - C2 -1L6H - NLTPX_ORYSJ -
24 HHSearch 42.8015%-105 - C2 -1S6D - 2SS8_HELAN -
22 HHSearch 42.3418% -99 - C2 -1B1U - IAAT_ELECO -
36 SP3 42.1715%-101 - C2 -1QPO - NADC_MYCTU -
2 Fugue 42.0421% -81 - C2 -2RKN - DIRL1_ARATH -
17 HHSearch 40.4118% -92 - C2 -2RKN - DIRL1_ARATH -
30 SP3 40.2221% -83 - C2 -1L6H - NLTPX_ORYSJ -
26 HHSearch 39.8718% -77 - C2 -3OB4 - ? -
6 Fugue 37.5916% -63 - C2 -2D5R - TOB1_HUMAN -


User Run . : Multi Template Modeling Result:

(3 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]



LPC_A_3(1BWO)
NLTP1_WHEAT
[Raw transfer]



LPC_A_4(1BWO)
NLTP1_WHEAT
[Raw transfer]
38 94.40100%-115 - C- -M038 - -
44 92.21100%-121 - C- -M044 - -
42 90.14100%-114 - C- -M042 - -