@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : new_query: (2014-05-08 )
AISCGQVASAIAPCISYARGQGSGPSAGCCSGVKSLNNAARTTADRRAACNCLKNAAAGVSGLNAGNAASIPSKCGVSIPYTISTSTDCSRVN

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]




DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]




LPC_A_3(1BWO)
NLTP1_WHEAT
[Raw transfer]




LPC_A_4(1BWO)
NLTP1_WHEAT
[Raw transfer]




29 SP3 95.4198%-107 - C2 -1FK5 5.9 NLTP_MAIZE
11 HHSearch 90.4499%-112 - C2 -1AFH - NLTP_MAIZE -
12 HHSearch 85.3062%-116 - C2 -1T12 - NLTP1_TOBAC -
16 HHSearch 84.4259%-111 - C2 -1BWO 6.4 NLTP1_WHEAT
14 HHSearch 80.4258%-113 - C2 -2ALG 3.7 NLTP1_PRUPE
15 HHSearch 78.7252%-116 - C2 -1SIY - NLTP1_VIGRR -
23 HHSearch 54.3122%-138 - C2 -1BEA - ITRF_MAIZE -
31 SP3 53.4619%-119 * C2 *1HSS - IAA1_WHEAT -
26 HHSearch 53.2025%-112 - C2 -1SM7 - ? -
27 HHSearch 50.8528% -91 - C2 -1PSY - 2SS_RICCO -
4 Fugue 49.8226% -45 - C2 -1PSY - 2SS_RICCO -
3 Fugue 46.2131%-100 - C2 -1L6H - NLTPX_ORYSJ -
25 HHSearch 44.2220% -76 - C2 -3OB4 - ? -
22 HHSearch 44.1918% -99 - C2 -1B1U - IAAT_ELECO -
24 HHSearch 43.9516%-103 - C2 -1S6D - 2SS8_HELAN -
2 Fugue 42.5022% -79 - C2 -2RKN - DIRL1_ARATH -
17 HHSearch 42.3120% -91 - C2 -2RKN - DIRL1_ARATH -
9 Fugue 40.4618% -45 - C2 -1HSS - IAA1_WHEAT -
30 SP3 40.2121% -80 - C2 -1L6H - NLTPX_ORYSJ -
7 Fugue 37.0613% -58 - C2 -1W2Q - CONG_ARAHY -


User Run . : Multi Template Modeling Result:

(3 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]




DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]




LPC_A_3(1BWO)
NLTP1_WHEAT
[Raw transfer]




LPC_A_4(1BWO)
NLTP1_WHEAT
[Raw transfer]




39 95.41100%-120 - C- -M039 - -
46 89.06100%-116 - C- -M046 - -
40 87.57100%-114 - C- -M040 - -