@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : new_query: (2014-05-08 )
AITCGQVSSAIAPCLSYARGTGSAPSASCCSGVRNLKSAASTAADRRAACNCLKNAARGVSGLNAGNAASIPSKCGVSIPYTISTSTDCSRVN

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]




DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]




LPC_A_3(1BWO)
NLTP1_WHEAT
[Raw transfer]




LPC_A_4(1BWO)
NLTP1_WHEAT
[Raw transfer]




28 SP3 92.5387%-107 - C1 -1FK5 6.2 NLTP_MAIZE
11 HHSearch 88.4787%-107 - C1 -1AFH - NLTP_MAIZE -
15 HHSearch 86.1958%-113 - C1 -1BWO 6.6 NLTP1_WHEAT
12 HHSearch 84.7360%-111 - C1 -1T12 - NLTP1_TOBAC -
14 HHSearch 82.5057%-113 - C1 -2ALG 3.6 NLTP1_PRUPE
16 HHSearch 75.1949%-113 - C1 -1SIY - NLTP1_VIGRR -
23 HHSearch 55.4922%-136 - C1 -1BEA - ITRF_MAIZE -
31 SP3 54.2119%-117 - C1 -1HSS - IAA1_WHEAT -
25 HHSearch 52.8824%-116 - C1 -1SM7 - ? -
3 Fugue 48.9527%-104 - C1 -1L6H - NLTPX_ORYSJ -
26 HHSearch 47.0027% -83 - C1 -1PSY - 2SS_RICCO -
2 Fugue 46.8922% -73 - C1 -2RKN - DIRL1_ARATH -
35 SP3 46.7018%-101 - C1 -1QPO - NADC_MYCTU -
4 Fugue 45.8825% -66 - C1 -1PSY - 2SS_RICCO -
22 HHSearch 44.4118%-102 - C1 -1B1U - IAAT_ELECO -
29 SP3 44.3321% -76 - C1 -1L6H - NLTPX_ORYSJ -
17 HHSearch 43.7120% -82 - C1 -2RKN - DIRL1_ARATH -
24 HHSearch 39.8720% -64 - C1 -3OB4 - ? -
18 HHSearch 38.4631% -80 - C1 -1L6H - NLTPX_ORYSJ -
19 HHSearch 35.6325% -58 - C1 -1N89 - NLT2G_WHEAT -


User Run . : Multi Template Modeling Result:

(4 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]




DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]




LPC_A_3(1BWO)
NLTP1_WHEAT
[Raw transfer]




LPC_A_4(1BWO)
NLTP1_WHEAT
[Raw transfer]




43 94.65100%-115 - C- -M043 - -
41 94.38100%-116 - C- -M041 - -
38 94.08100%-111 - C- -M038 - -
37 94.08100%-113 - C- -M037 - -