@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : 431_tI_ZEAMP: (2014-05-08 )
AISCGQVASAIAPCISYARGQGSGPSAGCCSGVRSLNNAARTTADRRAACNCLKNAAAGVSGLNAGNAASIPSKCGVSIPYTISTSTDCSRVN

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]



LPC_A_3(1BWO)
NLTP1_WHEAT
[Raw transfer]



LPC_A_4(1BWO)
NLTP1_WHEAT
[Raw transfer]
29 SP3 95.50100%-109 - C3 -1FK5 5.7 NLTP_MAIZE
1 HHSearch 91.82100%-114 - C3 -1AFH - NLTP_MAIZE -
2 HHSearch 83.3860%-117 - C3 -1T12 - NLTP1_TOBAC -
6 HHSearch 82.6258%-112 - C3 -1BWO 6.4 NLTP1_WHEAT
4 HHSearch 80.2660%-115 - C3 -2ALG 3.7 NLTP1_PRUPE
5 HHSearch 79.2152%-119 - C3 -1SIY - NLTP1_VIGRR -
15 HHSearch 54.9425%-116 - C3 -1SM7 - ? -
14 HHSearch 54.4122%-141 - C3 -1BEA - ITRF_MAIZE -
32 SP3 52.4619%-116 - C3 -1HSS - IAA1_WHEAT -
17 HHSearch 49.0427% -92 - C3 -1PSY - 2SS_RICCO -
22 Fugue 48.9425% -46 - C3 -1PSY - 2SS_RICCO -
21 Fugue 46.8533%-104 - C3 -1L6H - NLTPX_ORYSJ -
38 SP3 44.6415% -91 * C3 *1S6D - 2SS8_HELAN -
12 HHSearch 44.0918% -99 - C3 -1B1U - IAAT_ELECO -
13 HHSearch 42.5315%-101 - C3 -1S6D - 2SS8_HELAN -
36 SP3 42.1916% -98 - C3 -1QPO - NADC_MYCTU -
20 Fugue 41.5222% -81 - C3 -2RKN - DIRL1_ARATH -
7 HHSearch 41.0920% -93 - C3 -2RKN - DIRL1_ARATH -
16 HHSearch 40.7220% -77 - C3 -3OB4 - ? -
27 Fugue 40.0818% -46 - C3 -1HSS - IAA1_WHEAT -


User Run . : Multi Template Modeling Result:

(5 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]



LPC_A_3(1BWO)
NLTP1_WHEAT
[Raw transfer]



LPC_A_4(1BWO)
NLTP1_WHEAT
[Raw transfer]
39 94.80100%-119 - C- -M039 - -
46 93.67100%-122 - C- -M046 - -
42 93.63100%-121 - C- -M042 - -
45 92.77100%-112 - C- -M045 - -
40 87.36100%-111 - C- -M040 - -