@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : new_query: (2014-05-08 )
AITCGQVSSAIAPCLSYARGTGSAPSASCCSGVRSLKSAASTAADRRAACNCLKNAARGVSGLNAGNAASIPSKCGVSIPYTISTSTDCSRVN

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]



LPC_A_3(1BWO)
NLTP1_WHEAT
[Raw transfer]



LPC_A_4(1BWO)
NLTP1_WHEAT
[Raw transfer]
29 SP3 90.5888%-107 - C1 -1FK5 6.2 NLTP_MAIZE
16 HHSearch 86.0857%-113 - C1 -1BWO 6.6 NLTP1_WHEAT
11 HHSearch 86.0688%-107 - C1 -1AFH - NLTP_MAIZE -
12 HHSearch 83.9360%-112 - C1 -1T12 - NLTP1_TOBAC -
14 HHSearch 81.5055%-113 - C1 -2ALG 3.6 NLTP1_PRUPE
15 HHSearch 75.1248%-114 - C1 -1SIY - NLTP1_VIGRR -
23 HHSearch 55.5622%-138 - C1 -1BEA - ITRF_MAIZE -
31 SP3 54.3619%-118 - C1 -1HSS - IAA1_WHEAT -
25 HHSearch 51.2323%-113 - C1 -1SM7 - ? -
3 Fugue 48.5427%-104 - C1 -1L6H - NLTPX_ORYSJ -
27 HHSearch 46.7927% -84 - C1 -1PSY - 2SS_RICCO -
36 SP3 46.2118%-102 - C1 -1QPO - NADC_MYCTU -
5 Fugue 45.6825% -67 - C1 -1PSY - 2SS_RICCO -
22 HHSearch 44.5218%-102 * C1 *1B1U - IAAT_ELECO -
17 HHSearch 44.2620% -91 - C1 -2RKN - DIRL1_ARATH -
30 SP3 43.9121% -76 - C1 -1L6H - NLTPX_ORYSJ -
24 HHSearch 42.6320% -63 - C1 -3OB4 - ? -
2 Fugue 42.4722% -75 - C1 -2RKN - DIRL1_ARATH -
26 HHSearch 40.7515% -99 - C1 -1S6D - 2SS8_HELAN -
18 HHSearch 37.9631% -80 - C1 -1L6H - NLTPX_ORYSJ -


User Run . : Multi Template Modeling Result:

(3 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]



LPC_A_3(1BWO)
NLTP1_WHEAT
[Raw transfer]



LPC_A_4(1BWO)
NLTP1_WHEAT
[Raw transfer]
42 95.47100%-119 - C- -M042 - -
38 93.48100%-107 - C- -M038 - -
44 91.18100%-116 - C- -M044 - -